protocols::toolbox::task_operations::SelectByDensityFitOperation Class Reference

#include <SelectByDensityFitOperation.hh>

Public Member Functions
	SelectByDensityFitOperation (core::Real threshold=0.72, bool invert=0)
virtual	~SelectByDensityFitOperation ()
virtual core::pack::task::operation::TaskOperationOP	clone () const
virtual void	apply (core::pose::Pose const &, core::pack::task::PackerTask &) const
void	parse_tag (TagCOP tag, DataMap &)
void	parse_def (utility::lua::LuaObject const &def)

Private Attributes
core::Real	threshold_
bool	invert_

Constructor & Destructor Documentation

SelectByDensityFitOperation::SelectByDensityFitOperation	(	core::Real	threshold = 0.72,
		bool	invert = 0
	)

Referenced by clone().

SelectByDensityFitOperation::~SelectByDensityFitOperation ( )

virtual

Member Function Documentation

void SelectByDensityFitOperation::apply ( core::pose::Pose const &  const_pose, core::pack::task::PackerTask &  task  ) const

virtual

Implements core::pack::task::operation::TaskOperation.

References core::pack::task::ResidueLevelTask::being_designed(), core::pack::task::ResidueLevelTask::being_packed(), core::scoring::elec_dens_window, core::scoring::electron_density::getDensityMap(), core::scoring::getScoreFunction(), invert_, core::scoring::electron_density::ElectronDensity::matchRes(), core::pack::task::PackerTask::nonconst_residue_task(), nres, option, core::pack::task::ResidueLevelTask::prevent_repacking(), score, scoring, core::scoring::electron_density::ElectronDensity::set_nres(), core::scoring::electron_density::ElectronDensity::setScoreWindowContext(), core::scoring::electron_density::ElectronDensity::setWindow(), edensity::sliding_window, threshold_, protocols::TR, and user.

core::pack::task::operation::TaskOperationOP SelectByDensityFitOperation::clone ( ) const

virtual

Implements core::pack::task::operation::TaskOperation.

References SelectByDensityFitOperation().

void SelectByDensityFitOperation::parse_def

(

utility::lua::LuaObject const &

def

)

References invert_, threshold_, and utility::lua::LuaObject::to().

void SelectByDensityFitOperation::parse_tag	(	TagCOP	tag,
		DataMap &
	)

References invert_, and threshold_.

Member Data Documentation

bool protocols::toolbox::task_operations::SelectByDensityFitOperation::invert_

private

Referenced by apply(), parse_def(), and parse_tag().

core::Real protocols::toolbox::task_operations::SelectByDensityFitOperation::threshold_

private

Referenced by apply(), parse_def(), and parse_tag().

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The documentation for this class was generated from the following files:

• symlinks/rosetta/src/protocols/toolbox/task_operations/SelectByDensityFitOperation.hh
• symlinks/rosetta/src/protocols/toolbox/task_operations/SelectByDensityFitOperation.cc