| ALL enum value | protocols::protein_interface_design::filters::AtomicContactCountFilter | private |
| apply(core::pose::Pose const &) const | protocols::protein_interface_design::filters::AtomicContactCountFilter | inlinevirtual |
| protocols::filters::Filter::apply(core::io::serialization::PipeMap &pmap) | protocols::filters::Filter | virtual |
| AtomicContactCountFilter() | protocols::protein_interface_design::filters::AtomicContactCountFilter | |
| AtomicContactCountFilter(core::Real distance_cutoff) | protocols::protein_interface_design::filters::AtomicContactCountFilter | |
| AtomicContactCountFilter(AtomicContactCountFilter const ©) | protocols::protein_interface_design::filters::AtomicContactCountFilter | |
| clear() | protocols::filters::Filter | inlinevirtual |
| clone() const | protocols::protein_interface_design::filters::AtomicContactCountFilter | virtual |
| compute(core::pose::Pose const &) const | protocols::protein_interface_design::filters::AtomicContactCountFilter | |
| CROSS_CHAIN_ALL enum value | protocols::protein_interface_design::filters::AtomicContactCountFilter | private |
| CROSS_CHAIN_DETECTED enum value | protocols::protein_interface_design::filters::AtomicContactCountFilter | private |
| CROSS_JUMP enum value | protocols::protein_interface_design::filters::AtomicContactCountFilter | private |
| distance_cutoff_ | protocols::protein_interface_design::filters::AtomicContactCountFilter | private |
| Filter() | protocols::filters::Filter | |
| Filter(std::string const &) | protocols::filters::Filter | |
| Filter(Filter const &) | protocols::filters::Filter | |
| filter_mode_ | protocols::protein_interface_design::filters::AtomicContactCountFilter | private |
| fresh_instance() const | protocols::protein_interface_design::filters::AtomicContactCountFilter | virtual |
| get_type() const | protocols::filters::Filter | inlinevirtual |
| get_user_defined_name() const | protocols::filters::Filter | inline |
| initialize_all_atoms(core::pack::task::TaskFactoryOP task_factory=NULL) | protocols::protein_interface_design::filters::AtomicContactCountFilter | |
| initialize_cross_chain(core::pack::task::TaskFactoryOP task_factory=NULL, bool normalize_by_sasa=false, bool detect_chains_for_interface_by_task=false) | protocols::protein_interface_design::filters::AtomicContactCountFilter | |
| initialize_cross_jump(core::Size jump, std::string sym_dof_name="", core::pack::task::TaskFactoryOP task_factory=NULL, bool normalize_by_sasa=false) | protocols::protein_interface_design::filters::AtomicContactCountFilter | |
| jump_ | protocols::protein_interface_design::filters::AtomicContactCountFilter | private |
| Mode enum name | protocols::protein_interface_design::filters::AtomicContactCountFilter | private |
| name() const | protocols::protein_interface_design::filters::AtomicContactCountFilter | inlinevirtual |
| normalize_by_sasa_ | protocols::protein_interface_design::filters::AtomicContactCountFilter | private |
| parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks) | protocols::filters::Filter | virtual |
| parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &, protocols::filters::Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &) | protocols::protein_interface_design::filters::AtomicContactCountFilter | virtual |
| report(std::ostream &, core::pose::Pose const &) const | protocols::filters::Filter | inlinevirtual |
| report_sm(core::pose::Pose const &pose) const | protocols::protein_interface_design::filters::AtomicContactCountFilter | inlinevirtual |
| score(core::io::serialization::PipeMap &pmap) | protocols::filters::Filter | virtual |
| score(core::pose::Pose &pose) | protocols::filters::Filter | virtual |
| scorename_ | protocols::filters::Filter | protected |
| set_user_defined_name(std::string const &name) | protocols::filters::Filter | inline |
| ss_only_ | protocols::protein_interface_design::filters::AtomicContactCountFilter | private |
| sym_dof_name_ | protocols::protein_interface_design::filters::AtomicContactCountFilter | private |
| task_factory_ | protocols::protein_interface_design::filters::AtomicContactCountFilter | private |
| ~AtomicContactCountFilter() | protocols::protein_interface_design::filters::AtomicContactCountFilter | virtual |
| ~Filter() | protocols::filters::Filter | virtual |