protocols::simple_filters::SymmetricMotifFilter Member List

This is the complete list of members for protocols::simple_filters::SymmetricMotifFilter, including all inherited members.

add_motif(core::pose::PoseOP motif)	protocols::simple_filters::SymmetricMotifFilter
angle_thresh_	protocols::simple_filters::SymmetricMotifFilter	private
angle_wt_	protocols::simple_filters::SymmetricMotifFilter	private
apply(core::pose::Pose const &pose) const	protocols::simple_filters::SymmetricMotifFilter	virtual
protocols::filters::Filter::apply(core::io::serialization::PipeMap &pmap)	protocols::filters::Filter	virtual
cas_chainA	protocols::simple_filters::SymmetricMotifFilter	private
cas_chainB	protocols::simple_filters::SymmetricMotifFilter	private
clash_thresh_	protocols::simple_filters::SymmetricMotifFilter	private
clash_wt_	protocols::simple_filters::SymmetricMotifFilter	private
clear()	protocols::filters::Filter	inlinevirtual
clone() const	protocols::simple_filters::SymmetricMotifFilter	virtual
compute(core::pose::Pose const &pose, core::Real &best_score, std::string &motifhit) const	protocols::simple_filters::SymmetricMotifFilter
compute_d2(core::pose::Pose const &pose, core::Real &best_score, std::string &motifhit) const	protocols::simple_filters::SymmetricMotifFilter
delta_coms	protocols::simple_filters::SymmetricMotifFilter	private
Filter()	protocols::filters::Filter
Filter(std::string const &)	protocols::filters::Filter
Filter(Filter const &)	protocols::filters::Filter
forced_pos_	protocols::simple_filters::SymmetricMotifFilter	private
fresh_instance() const	protocols::simple_filters::SymmetricMotifFilter	inlinevirtual
get_type() const	protocols::filters::Filter	inlinevirtual
get_user_defined_name() const	protocols::filters::Filter	inline
motif_cuts	protocols::simple_filters::SymmetricMotifFilter	private
name() const	protocols::filters::Filter	inlinevirtual
nsegs_	protocols::simple_filters::SymmetricMotifFilter	private
parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks)	protocols::filters::Filter	virtual
parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &data_map, protocols::filters::Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &reference_pose)	protocols::simple_filters::SymmetricMotifFilter	virtual
process_motifs()	protocols::simple_filters::SymmetricMotifFilter
Qs	protocols::simple_filters::SymmetricMotifFilter	private
Rdimers	protocols::simple_filters::SymmetricMotifFilter	private
ref_motifs_	protocols::simple_filters::SymmetricMotifFilter	private
report(std::ostream &out, core::pose::Pose const &pose) const	protocols::simple_filters::SymmetricMotifFilter	virtual
report_sm(core::pose::Pose const &pose) const	protocols::simple_filters::SymmetricMotifFilter	virtual
rmsd_thresh_	protocols::simple_filters::SymmetricMotifFilter	private
rmsd_wt_	protocols::simple_filters::SymmetricMotifFilter	private
score(core::io::serialization::PipeMap &pmap)	protocols::filters::Filter	virtual
score(core::pose::Pose &pose)	protocols::filters::Filter	virtual
score_d2(core::Real rms, core::Real angle, core::Real trans, core::Size clash) const	protocols::simple_filters::SymmetricMotifFilter	inline
scorename_	protocols::filters::Filter	protected
set_defaults()	protocols::simple_filters::SymmetricMotifFilter
set_symm(std::string symm_type_in)	protocols::simple_filters::SymmetricMotifFilter	inline
set_thresholds(core::Real angle_thresh_in, core::Real trans_thresh_in, core::Real rmsd_thresh_in, core::Size)	protocols::simple_filters::SymmetricMotifFilter	inline
set_user_defined_name(std::string const &name)	protocols::filters::Filter	inline
set_weights(core::Real angle_thresh_in, core::Real trans_thresh_in, core::Real rmsd_thresh_in)	protocols::simple_filters::SymmetricMotifFilter	inline
symm_axes	protocols::simple_filters::SymmetricMotifFilter	private
symm_orders	protocols::simple_filters::SymmetricMotifFilter	private
symm_type_	protocols::simple_filters::SymmetricMotifFilter	private
SymmetricMotifFilter()	protocols::simple_filters::SymmetricMotifFilter
SymmetricMotifFilter(utility::vector1< core::pose::PoseOP > reference_motifs, std::string symm_type_in="D2")	protocols::simple_filters::SymmetricMotifFilter
trans_thresh_	protocols::simple_filters::SymmetricMotifFilter	private
trans_wt_	protocols::simple_filters::SymmetricMotifFilter	private
~Filter()	protocols::filters::Filter	virtual
~SymmetricMotifFilter()	protocols::simple_filters::SymmetricMotifFilter	virtual