Rosetta Protocols  2014.16.56682
Classes | Namespaces | Functions
StepWiseRNA_ResidueInfo.hh File Reference
#include <core/types.hh>
#include <core/pose/Pose.fwd.hh>
#include <utility/vector1.hh>
#include <string>
#include <map>

Classes

struct  protocols::stepwise::sampling::rna::Residue_info
 

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::stepwise
 
 protocols::stepwise::sampling
 
 protocols::stepwise::sampling::rna
 

Functions

void protocols::stepwise::sampling::rna::print_torsion_info (core::pose::Pose const &pose, core::Size const seq_num, core::Size const rna_torsion_number, std::string const type)
 
utility::vector1< Residue_info > protocols::stepwise::sampling::rna::Convert_rebuild_residue_string_to_list (std::string const &rebuild_residue_string)
 
void protocols::stepwise::sampling::rna::output_residue_struct (Residue_info const &residue)
 
std::string protocols::stepwise::sampling::rna::get_one_letter_name (std::string const &three_letter_name)
 
std::string protocols::stepwise::sampling::rna::get_three_letter_name (std::string const &one_letter_name)
 
Size protocols::stepwise::sampling::rna::get_max_seq_num_from_res_map (std::map< core::Size, core::Size > const &my_map)
 
void protocols::stepwise::sampling::rna::output_res_map (std::map< core::Size, core::Size > const &my_map, Size const max_seq_num)
 
void protocols::stepwise::sampling::rna::output_copy_dofs (utility::vector1< Residue_info > copy_dofs)
 
utility::vector1< Residue_info > protocols::stepwise::sampling::rna::get_copy_dofs_from_fasta (std::string const full_fasta_sequence)
 
Residue_info protocols::stepwise::sampling::rna::get_residue_from_seq_num (Size const &seq_num, utility::vector1< Residue_info > const &copy_dofs)
 
bool protocols::stepwise::sampling::rna::contain_residue_at_seq_num (Size seq_num, utility::vector1< Residue_info > const &copy_dofs)
 
utility::vector1
< utility::vector1
< Residue_info > > 
protocols::stepwise::sampling::rna::create_strand_list (utility::vector1< Residue_info > const &copy_dofs)
 
utility::vector1< Residue_info > protocols::stepwise::sampling::rna::set_difference (utility::vector1< Residue_info > const &copy_dofs_1, utility::vector1< Residue_info > const &copy_dofs_2)
 
utility::vector1< Residue_info > protocols::stepwise::sampling::rna::set_union (utility::vector1< Residue_info > const &copy_dofs_1, utility::vector1< Residue_info > const &copy_dofs_2)
 
bool protocols::stepwise::sampling::rna::copy_dofs_sort_criterion (Residue_info residue_info_1, Residue_info residue_info_2)
 
void protocols::stepwise::sampling::rna::sort_copy_dofs (utility::vector1< Residue_info > &copy_dofs)
 

Detailed Description

Detailed:
Author
Parin Sripakdeevong