| apply(core::pose::Pose &pose) | protocols::seeded_abinitio::PlaceFragments | virtual |
| protocols::moves::Mover::apply(core::io::serialization::PipeMap &pmap) | protocols::moves::Mover | virtual |
| apply_frame(core::pose::Pose &pose, core::fragment::Frame &frame, int aln_len, core::Size seq_start, core::Size max_frag_len) | protocols::seeded_abinitio::PlaceFragments | |
| cartfrag_overlap_ | protocols::seeded_abinitio::PlaceFragments | private |
| clear_info() | protocols::moves::Mover | inlinevirtual |
| clone() const | protocols::seeded_abinitio::PlaceFragments | inlinevirtual |
| create() | protocols::moves::Mover | virtual |
| create_fragments(core::pose::Pose &pose, core::Size insert_start, core::Size insert_stop) | protocols::seeded_abinitio::PlaceFragments | |
| filter_ | protocols::seeded_abinitio::PlaceFragments | private |
| Filters_map typedef | protocols::moves::Mover | |
| fragments_ | protocols::seeded_abinitio::PlaceFragments | private |
| frags_onflight_ | protocols::seeded_abinitio::PlaceFragments | private |
| fresh_instance() const | protocols::seeded_abinitio::PlaceFragments | inlinevirtual |
| fsize_ | protocols::seeded_abinitio::PlaceFragments | private |
| get_additional_output() | protocols::moves::Mover | virtual |
| get_current_job() const | protocols::moves::Mover | |
| get_current_tag() const | protocols::moves::Mover | inline |
| get_input_pose() const | protocols::moves::Mover | |
| get_last_move_status() const | protocols::moves::Mover | |
| get_name() const | protocols::seeded_abinitio::PlaceFragments | virtual |
| get_native_pose() const | protocols::moves::Mover | |
| get_type() const | protocols::moves::Mover | inline |
| info() | protocols::moves::Mover | inlinevirtual |
| info() const | protocols::moves::Mover | inlinevirtual |
| initialize(const core::fragment::FragSetOP fragments) | protocols::seeded_abinitio::PlaceFragments | private |
| initialize_fragments(const core::fragment::FragSetOP &fragments) | protocols::seeded_abinitio::PlaceFragments | |
| input_stubs_ | protocols::seeded_abinitio::PlaceFragments | private |
| last_proposal_density_ratio() | protocols::moves::Mover | inlinevirtual |
| library_ | protocols::seeded_abinitio::PlaceFragments | private |
| Mover() | protocols::moves::Mover | |
| Mover(std::string const &type_name) | protocols::moves::Mover | |
| Mover(Mover const &other) | protocols::moves::Mover | |
| mover_ | protocols::seeded_abinitio::PlaceFragments | private |
| name() | protocols::moves::Mover | inlinestatic |
| nfrags_ | protocols::seeded_abinitio::PlaceFragments | private |
| operator=(Mover const &other) | protocols::moves::Mover | |
| parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks, MoverCacheSP cache) | protocols::moves::Mover | virtual |
| parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &, protocols::filters::Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &) | protocols::seeded_abinitio::PlaceFragments | virtual |
| parse_state(SerializableState const &state) | protocols::moves::Mover | virtual |
| PlaceFragments() | protocols::seeded_abinitio::PlaceFragments | |
| Pose typedef | protocols::seeded_abinitio::PlaceFragments | |
| PoseCOP typedef | protocols::moves::Mover | |
| register_options() | protocols::moves::Mover | inlinestatic |
| reinitialize_for_each_job() const | protocols::moves::Mover | virtual |
| reinitialize_for_new_input() const | protocols::moves::Mover | virtual |
| reset_status() | protocols::moves::Mover | |
| save_state(SerializableState &state) | protocols::moves::Mover | virtual |
| seg_vector_ | protocols::seeded_abinitio::PlaceFragments | private |
| set_current_job(protocols::jobdist::BasicJobCOP job) | protocols::moves::Mover | |
| set_current_tag(std::string const &new_tag) | protocols::moves::Mover | inline |
| set_input_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_last_move_status(MoverStatus status) | protocols::moves::Mover | protected |
| set_native_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| show(std::ostream &output=std::cout) const | protocols::moves::Mover | virtual |
| ss_ | protocols::seeded_abinitio::PlaceFragments | private |
| Strings typedef | protocols::moves::Mover | |
| TagCOP typedef | protocols::moves::Mover | |
| test_move(Pose &pose) | protocols::moves::Mover | inlinevirtual |
| type() const | protocols::moves::Mover | inline |
| type(const std::string &type_in) | protocols::moves::Mover | inline |
| use_seq_ | protocols::seeded_abinitio::PlaceFragments | private |
| ~Mover() | protocols::moves::Mover | virtual |
| ~PlaceFragments() | protocols::seeded_abinitio::PlaceFragments | virtual |
1.8.7