protocols::jd2::PoseInputStreamJobInputter Class Reference

#include <PoseInputStreamJobInputter.hh>

Public Member Functions
	PoseInputStreamJobInputter ()
virtual	~PoseInputStreamJobInputter ()
virtual void	pose_from_job (core::pose::Pose &pose, JobOP job)
	This implementation simply calls fill_pose on the PoseInputStream object. More...
virtual void	fill_jobs (Jobs &jobs)
virtual JobInputterInputSource::Enum	input_source () const
	Return the type of input source that the PoseInputStreamJobInputter is currently using. More...
Public Member Functions inherited from protocols::jd2::JobInputter
virtual	~JobInputter ()

Private Attributes
core::chemical::ResidueTypeSetCAP	rsd_set_
core::import_pose::pose_stream::MetaPoseInputStream	input_

Additional Inherited Members
Static Public Member Functions inherited from protocols::jd2::JobInputter
static std::string	job_inputter_input_source_to_string (JobInputterInputSource::Enum source)
	call this with input_source() to get the input source of a particular job inputter More...
Protected Member Functions inherited from protocols::jd2::JobInputter
void	load_pose_into_job (core::pose::Pose const &pose, JobOP job)
	this function modifies the InnerJob's pose. Access to that pose is via friendship. More...
void	load_pose_into_job (core::pose::PoseCOP pose, JobOP job)
	this function modifies the InnerJob's pose. Access to that pose is via friendship. More...
virtual core::Size	get_nstruct () const
	this code is here to restrict the use of inner_job_nonconst (this class is a friend class and can do it) More...

Detailed Description

This is the simplest implementation of JobInputter, which reads from -s/-l and SilentFile files.

Constructor & Destructor Documentation

protocols::jd2::PoseInputStreamJobInputter::PoseInputStreamJobInputter

(

)

References protocols::jd2::tr.

Referenced by protocols::jd2::PoseInputStreamJobInputterCreator::create_JobInputter().

protocols::jd2::PoseInputStreamJobInputter::~PoseInputStreamJobInputter ( )

virtual

Member Function Documentation

void protocols::jd2::PoseInputStreamJobInputter::fill_jobs ( Jobs &  jobs )

virtual

this function determines what jobs exist from -in::file::silent and -in::file::tags

Implements protocols::jd2::JobInputter.

References input_, nstruct, out::nstruct, option, rsd_set_, rsd_set_from_cmd_line(), core::chemical::rsd_set_from_cmd_line(), shuffle_nstruct, out::shuffle_nstruct, streams_from_cmd_line(), and protocols::jd2::tr.

JobInputterInputSource::Enum protocols::jd2::PoseInputStreamJobInputter::input_source ( ) const

virtual

Return the type of input source that the PoseInputStreamJobInputter is currently using.

Implements protocols::jd2::JobInputter.

References protocols::jd2::JobInputterInputSource::UNKNOWN.

void protocols::jd2::PoseInputStreamJobInputter::pose_from_job ( core::pose::Pose &  pose, JobOP  job  )

virtual

This implementation simply calls fill_pose on the PoseInputStream object.

Implements protocols::jd2::JobInputter.

References core::pose::Pose::clear(), core::import_pose::pose_stream::MetaPoseInputStream::fill_pose(), core::import_pose::pose_stream::MetaPoseInputStream::has_another_pose(), input_, rsd_set_, protocols::jd2::tr, and utility_exit_with_message.

Member Data Documentation

core::import_pose::pose_stream::MetaPoseInputStream protocols::jd2::PoseInputStreamJobInputter::input_

private

Referenced by fill_jobs(), and pose_from_job().

core::chemical::ResidueTypeSetCAP protocols::jd2::PoseInputStreamJobInputter::rsd_set_

private

Referenced by fill_jobs(), and pose_from_job().

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The documentation for this class was generated from the following files:

• symlinks/rosetta/src/protocols/jd2/PoseInputStreamJobInputter.hh
• symlinks/rosetta/src/protocols/jd2/PoseInputStreamJobInputter.cc