protocols::toolbox::task_operations::RestrictResiduesToRepackingOperation Class Reference

#include <RestrictResiduesToRepackingOperation.hh>

Public Types
typedef RestrictOperationsBase	parent
Public Types inherited from protocols::toolbox::task_operations::RestrictOperationsBase
typedef core::pack::task::operation::TaskOperation	TaskOperation
typedef core::pack::task::operation::TaskOperationOP	TaskOperationOP
typedef TaskOperation	parent

Public Member Functions
	RestrictResiduesToRepackingOperation ()
	RestrictResiduesToRepackingOperation (utility::vector1< core::Size > residues)
utility::vector1< core::Size >	get_residues () const
void	set_residues (utility::vector1< core::Size > residues_vec)
virtual	~RestrictResiduesToRepackingOperation ()
virtual TaskOperationOP	clone () const
virtual void	apply (core::pose::Pose const &, core::pack::task::PackerTask &) const
virtual void	parse_tag (TagCOP, DataMap &)
Public Member Functions inherited from protocols::toolbox::task_operations::RestrictOperationsBase
	RestrictOperationsBase ()
virtual	~RestrictOperationsBase ()

Private Attributes
std::string	unparsed_residues_
utility::vector1< core::Size >	residues_

Additional Inherited Members
Protected Member Functions inherited from protocols::toolbox::task_operations::RestrictOperationsBase
void	run_calculator (core::pose::Pose const &pose, std::string const &calculator, std::string const &calculation, utility::vector1_bool &residues) const
	this is the only real function - it takes a calculator name and calculation, and a PackerTask-compatible vector, and flips booleans in the vector according to the calculator More...

Detailed Description

this class is a TaskOperation to prevent repacking of residues not near an interface.

Member Typedef Documentation

typedef RestrictOperationsBase protocols::toolbox::task_operations::RestrictResiduesToRepackingOperation::parent

Constructor & Destructor Documentation

protocols::toolbox::task_operations::RestrictResiduesToRepackingOperation::RestrictResiduesToRepackingOperation

(

)

Referenced by clone().

protocols::toolbox::task_operations::RestrictResiduesToRepackingOperation::RestrictResiduesToRepackingOperation

(

utility::vector1< core::Size >

residues

)

protocols::toolbox::task_operations::RestrictResiduesToRepackingOperation::~RestrictResiduesToRepackingOperation ( )

virtual

Member Function Documentation

void protocols::toolbox::task_operations::RestrictResiduesToRepackingOperation::apply ( core::pose::Pose const &  pose, core::pack::task::PackerTask &  task  ) const

virtual

Implements protocols::toolbox::task_operations::RestrictOperationsBase.

References residues_, runtime_assert, and protocols::TR.

core::pack::task::operation::TaskOperationOP protocols::toolbox::task_operations::RestrictResiduesToRepackingOperation::clone ( ) const

virtual

Implements protocols::toolbox::task_operations::RestrictOperationsBase.

References RestrictResiduesToRepackingOperation().

utility::vector1< core::Size > protocols::toolbox::task_operations::RestrictResiduesToRepackingOperation::get_residues

(

)

const

References residues_.

void protocols::toolbox::task_operations::RestrictResiduesToRepackingOperation::parse_tag ( TagCOP  tag, DataMap &    )

virtual

References key, residues_, utility::string2int(), utility::string_split(), protocols::TR, and unparsed_residues_.

void protocols::toolbox::task_operations::RestrictResiduesToRepackingOperation::set_residues

(

utility::vector1< core::Size >

residues_vec

)

References residues_, and runtime_assert.

Member Data Documentation

utility::vector1< core::Size > protocols::toolbox::task_operations::RestrictResiduesToRepackingOperation::residues_

private

Referenced by apply(), get_residues(), parse_tag(), and set_residues().

std::string protocols::toolbox::task_operations::RestrictResiduesToRepackingOperation::unparsed_residues_

private

Referenced by parse_tag().

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The documentation for this class was generated from the following files:

• symlinks/rosetta/src/protocols/toolbox/task_operations/RestrictResiduesToRepackingOperation.hh
• symlinks/rosetta/src/protocols/toolbox/task_operations/RestrictResiduesToRepackingOperation.cc