protocols::forge::components::BDR Member List

This is the complete list of members for protocols::forge::components::BDR, including all inherited members.

add_instruction(BuildInstructionOP bi, String const &aa_during_design_refine=String())	protocols::forge::components::BDR
allowed_surface_aa()	protocols::forge::components::BDR	privatestatic
apply(Pose &pose)	protocols::forge::components::BDR	virtual
protocols::moves::Mover::apply(core::io::serialization::PipeMap &pmap)	protocols::moves::Mover	virtual
BDR()	protocols::forge::components::BDR
BDR(BDR const &rval)	protocols::forge::components::BDR
BuildInstructionOP typedef	protocols::forge::components::BDR
BuildManager typedef	protocols::forge::components::BDR
centroid_build(Pose &pose)	protocols::forge::components::BDR	private
centroid_loop_mover_str() const	protocols::forge::components::BDR	inline
centroid_loop_mover_str(String const &loop_mover_str)	protocols::forge::components::BDR	inline
centroid_loop_mover_str_	protocols::forge::components::BDR	private
centroid_scorefunction() const	protocols::forge::components::BDR
centroid_scorefunction(ScoreFunction const &sfx)	protocols::forge::components::BDR
centroid_scorefunction(ScoreFunctionOP sfx)	protocols::forge::components::BDR
centroid_sfx_	protocols::forge::components::BDR	private
clear_info()	protocols::moves::Mover	inlinevirtual
clone() const	protocols::forge::components::BDR	virtual
create()	protocols::moves::Mover	virtual
create_directed_dependency(BuildInstructionOP u, BuildInstructionOP v)	protocols::forge::components::BDR
design_info_	protocols::forge::components::BDR	private
design_refine(Pose &pose)	protocols::forge::components::BDR	private
DesignInfo typedef	protocols::forge::components::BDR
dr_cycles() const	protocols::forge::components::BDR	inline
dr_cycles(Size const cycles)	protocols::forge::components::BDR	inline
dr_cycles_	protocols::forge::components::BDR	private
Filters_map typedef	protocols::moves::Mover
fresh_instance() const	protocols::forge::components::BDR	virtual
fullatom_scorefunction() const	protocols::forge::components::BDR
fullatom_scorefunction(ScoreFunction const &sfx)	protocols::forge::components::BDR
fullatom_scorefunction(ScoreFunctionOP sfx)	protocols::forge::components::BDR
fullatom_sfx_	protocols::forge::components::BDR	private
generic_taskfactory()	protocols::forge::components::BDR	private
get_additional_output()	protocols::moves::Mover	virtual
get_current_job() const	protocols::moves::Mover
get_current_tag() const	protocols::moves::Mover	inline
get_input_pose() const	protocols::moves::Mover
get_last_move_status() const	protocols::moves::Mover
get_name() const	protocols::forge::components::BDR	virtual
get_native_pose() const	protocols::moves::Mover
get_type() const	protocols::moves::Mover	inline
info()	protocols::moves::Mover	inlinevirtual
info() const	protocols::moves::Mover	inlinevirtual
Interval typedef	protocols::forge::components::BDR
last_proposal_density_ratio()	protocols::moves::Mover	inlinevirtual
loops_buns_polar_calc_name()	protocols::forge::components::BDR	inlinestatic
manager_	protocols::forge::components::BDR	private
max_linear_chainbreak() const	protocols::forge::components::BDR	inline
max_linear_chainbreak(Real const threshold)	protocols::forge::components::BDR	inline
max_linear_chainbreak_	protocols::forge::components::BDR	private
Mover()	protocols::moves::Mover
Mover(std::string const &type_name)	protocols::moves::Mover
Mover(Mover const &other)	protocols::moves::Mover
MoverOP typedef	protocols::forge::components::BDR
name()	protocols::moves::Mover	inlinestatic
neighborhood_buns_polar_calc_name()	protocols::forge::components::BDR	inlinestatic
neighborhood_calc_name()	protocols::forge::components::BDR	inlinestatic
operator=(BDR const &rval)	protocols::forge::components::BDR	private
protocols::moves::Mover::operator=(Mover const &other)	protocols::moves::Mover
Original2Modified typedef	protocols::forge::components::BDR
OriginalInterval2DesignString typedef	protocols::forge::components::BDR
parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks, MoverCacheSP cache)	protocols::moves::Mover	virtual
parse_my_tag(TagCOP tag, basic::datacache::DataMap &data, Filters_map const &filters, Movers_map const &movers, Pose const &pose)	protocols::moves::Mover	virtual
parse_state(SerializableState const &state)	protocols::moves::Mover	virtual
Pose typedef	protocols::forge::components::BDR
PoseCOP typedef	protocols::moves::Mover
process_continuous_design_string(Interval const &original_interval, String const &design_str, Original2Modified const &original2modified_interval_endpoints, TaskFactoryOP design_tf)	protocols::forge::components::BDR	private
process_insert_design_string(Interval const &original_interval, String const &design_str, Original2Modified const &original2modified_interval_endpoints, TaskFactoryOP design_tf)	protocols::forge::components::BDR	private
Real typedef	protocols::forge::components::BDR
redesign_loop_neighborhood() const	protocols::forge::components::BDR	inline
redesign_loop_neighborhood(bool const flag)	protocols::forge::components::BDR	inline
redesign_loop_neighborhood_	protocols::forge::components::BDR	private
register_options()	protocols::moves::Mover	inlinestatic
reinitialize_for_each_job() const	protocols::moves::Mover	virtual
reinitialize_for_new_input() const	protocols::moves::Mover	virtual
reset_status()	protocols::moves::Mover
resfile() const	protocols::forge::components::BDR	inline
resfile(String const &filename)	protocols::forge::components::BDR	inline
resfile_	protocols::forge::components::BDR	private
save_state(SerializableState &state)	protocols::moves::Mover	virtual
ScoreFunction typedef	protocols::forge::components::BDR
ScoreFunctionOP typedef	protocols::forge::components::BDR
set_current_job(protocols::jobdist::BasicJobCOP job)	protocols::moves::Mover
set_current_tag(std::string const &new_tag)	protocols::moves::Mover	inline
set_input_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_last_move_status(MoverStatus status)	protocols::moves::Mover	protected
set_native_pose(PoseCOP pose)	protocols::moves::Mover	virtual
show(std::ostream &output=std::cout) const	protocols::moves::Mover	virtual
Size typedef	protocols::forge::components::BDR
String typedef	protocols::forge::components::BDR
Strings typedef	protocols::moves::Mover
Super typedef	protocols::forge::components::BDR	private
TagCOP typedef	protocols::moves::Mover
TaskFactoryOP typedef	protocols::forge::components::BDR
test_move(Pose &pose)	protocols::moves::Mover	inlinevirtual
type() const	protocols::moves::Mover	inline
type(const std::string &type_in)	protocols::moves::Mover	inline
use_fullmer() const	protocols::forge::components::BDR	inline
use_fullmer(bool const flag)	protocols::forge::components::BDR	inline
use_fullmer_	protocols::forge::components::BDR	private
use_sequence_bias() const	protocols::forge::components::BDR	inline
use_sequence_bias(bool const flag)	protocols::forge::components::BDR	inline
use_sequence_bias_	protocols::forge::components::BDR	private
vlb_	protocols::forge::components::BDR	private
~BDR()	protocols::forge::components::BDR	virtual
~Mover()	protocols::moves::Mover	virtual