Class for counting the number of matches given a particular discretization level. More...

#include <MatchSet.hh>

Public Types
typedef core::Real	Real

typedef core::Size	Size

typedef core::Vector	Vector

typedef numeric::geometry::BoundingBox < Vector >	BoundingBox

typedef numeric::geometry::hashing::Bin6D	Bin6D

typedef utility::vector1< Size >	HitCounts

typedef boost::unordered_map < boost::uint64_t, HitCounts, numeric::geometry::hashing::bin_index_hasher >	HitHash

Public Member Functions
	MatchCounter ()

virtual	~MatchCounter ()

void	set_bounding_box (BoundingBox const &bb)
	Use the same bounding box as the HitHasher / OccupiedSpaceHash. More...

void	set_n_geometric_constraints (Size ngeomcsts)

void	set_uniform_xyz_bin_width (Real bin_width)
	Give the same xyz bin witdh given to the HitHasher / OccupiedSpaceHash. More...

void	set_uniform_euler_angle_bin_width (Real bin_width_degrees)
	Give the same euler-angle bin witdh given to the HitHasher / OccupiedSpaceHash. More...

void	set_xyz_bin_widths (Vector const &bin_widths)
	Give the same xyz bin witdhs given to the HitHasher / OccupiedSpaceHash. More...

void	set_euler_bin_widths (Vector const &euler_bin_widths)
	Give the same euler-angle bin witdhs given to the HitHasher / OccupiedSpaceHash. More...

void	initialize ()
	Call this after the bounding-box and the bin-widths have been set up. Must be called before "add_hits" it called. This initializes the SixDCoordinateBinner. More...

void	add_hits (Size geomcst_id, std::list< Hit > const &hitlist)
	Add hits from a list of hits for a particular geometric constraint. More...

void	add_hits (Size geomcst_id, std::list< Hit const * > const &hitptrlist)
	Add hit from the input list of hits for a particular geometric constraint. More...

Size	count_n_matches () const
	Possibly slow method to predict the total number of matches given a set of hits and a particular grid resolution. (The main function that this class provides). More...

Private Attributes
BoundingBox	bb_

Size	n_geom_csts_

bool	initialized_

utility::fixedsizearray1< Real, 3 >	xyz_bin_widths_

utility::fixedsizearray1< Real, 3 >	euler_bin_widths_

numeric::geometry::hashing::SixDCoordinateBinnerOP	binner_

HitHash	hash_

Detailed Description

Class for counting the number of matches given a particular discretization level.

Member Typedef Documentation

typedef numeric::geometry::hashing::Bin6D protocols::match::MatchCounter::Bin6D

typedef numeric::geometry::BoundingBox< Vector > protocols::match::MatchCounter::BoundingBox

typedef utility::vector1< Size > protocols::match::MatchCounter::HitCounts

typedef boost::unordered_map< boost::uint64_t, HitCounts, numeric::geometry::hashing::bin_index_hasher > protocols::match::MatchCounter::HitHash

typedef core::Real protocols::match::MatchCounter::Real

typedef core::Size protocols::match::MatchCounter::Size

typedef core::Vector protocols::match::MatchCounter::Vector

Constructor & Destructor Documentation

protocols::match::MatchCounter::MatchCounter ( )

protocols::match::MatchCounter::~MatchCounter ( )

virtual

Member Function Documentation

void protocols::match::MatchCounter::add_hits	(	Size	geomcst_id,
		std::list< Hit > const &	hitlist
	)

Add hits from a list of hits for a particular geometric constraint.

References binner_, hash_, initialized_, and n_geom_csts_.

Referenced by protocols::match::Matcher::predict_n_matches_for_hit_subsets().

void protocols::match::MatchCounter::add_hits	(	Size	geomcst_id,
		std::list< Hit const * > const &	hitptrlist
	)

Add hit from the input list of hits for a particular geometric constraint.

References binner_, hash_, initialized_, and n_geom_csts_.

MatchCounter::Size protocols::match::MatchCounter::count_n_matches ( ) const

Possibly slow method to predict the total number of matches given a set of hits and a particular grid resolution. (The main function that this class provides).

References protocols::match::advance_to_neighbor_bin(), utility::LexicographicalIterator::at_end(), utility::LexicographicalIterator::begin(), begin, bin, binner_, utility::LexicographicalIterator::continue_at_dimension(), hash_, initialized_, n_geom_csts_, utility::FixedSizeLexicographicalIterator< S >::set_position_from_index(), and protocols::analysis::total.

Referenced by protocols::match::Matcher::predict_n_matches_for_hit_subsets().

void protocols::match::MatchCounter::initialize ( )

Call this after the bounding-box and the bin-widths have been set up. Must be called before "add_hits" it called. This initializes the SixDCoordinateBinner.

hash based on halfbin widths.

References bb_, binner_, euler_bin_widths_, initialized_, and xyz_bin_widths_.

Referenced by protocols::match::Matcher::predict_n_matches_for_hit_subsets().

void protocols::match::MatchCounter::set_bounding_box ( BoundingBox const & bb )

Use the same bounding box as the HitHasher / OccupiedSpaceHash.

References bb_, and initialized_.

Referenced by protocols::match::Matcher::predict_n_matches_for_hit_subsets().

void protocols::match::MatchCounter::set_euler_bin_widths ( Vector const & euler_bin_widths )

Give the same euler-angle bin witdhs given to the HitHasher / OccupiedSpaceHash.

References euler_bin_widths_, and initialized_.

Referenced by protocols::match::Matcher::predict_n_matches_for_hit_subsets().

void protocols::match::MatchCounter::set_n_geometric_constraints ( Size ngeomcsts )

References initialized_, and n_geom_csts_.

Referenced by protocols::match::Matcher::predict_n_matches_for_hit_subsets().

void protocols::match::MatchCounter::set_uniform_euler_angle_bin_width ( Real bin_width_degrees )

Give the same euler-angle bin witdh given to the HitHasher / OccupiedSpaceHash.

References euler_bin_widths_, and initialized_.

void protocols::match::MatchCounter::set_uniform_xyz_bin_width ( Real bin_width )

Give the same xyz bin witdh given to the HitHasher / OccupiedSpaceHash.

References initialized_, and xyz_bin_widths_.

void protocols::match::MatchCounter::set_xyz_bin_widths ( Vector const & bin_widths )

Give the same xyz bin witdhs given to the HitHasher / OccupiedSpaceHash.

References initialized_, and xyz_bin_widths_.

Referenced by protocols::match::Matcher::predict_n_matches_for_hit_subsets().

Member Data Documentation

BoundingBox protocols::match::MatchCounter::bb_

private

Referenced by initialize(), and set_bounding_box().

numeric::geometry::hashing::SixDCoordinateBinnerOP protocols::match::MatchCounter::binner_

private

Referenced by add_hits(), count_n_matches(), and initialize().

utility::fixedsizearray1< Real, 3 > protocols::match::MatchCounter::euler_bin_widths_

private

Referenced by initialize(), set_euler_bin_widths(), and set_uniform_euler_angle_bin_width().

HitHash protocols::match::MatchCounter::hash_

private

Referenced by add_hits(), and count_n_matches().

bool protocols::match::MatchCounter::initialized_

private

Referenced by add_hits(), count_n_matches(), initialize(), set_bounding_box(), set_euler_bin_widths(), set_n_geometric_constraints(), set_uniform_euler_angle_bin_width(), set_uniform_xyz_bin_width(), and set_xyz_bin_widths().

Size protocols::match::MatchCounter::n_geom_csts_

private

Referenced by add_hits(), count_n_matches(), and set_n_geometric_constraints().

utility::fixedsizearray1< Real, 3 > protocols::match::MatchCounter::xyz_bin_widths_

private

Referenced by initialize(), set_uniform_xyz_bin_width(), and set_xyz_bin_widths().

The documentation for this class was generated from the following files:

symlinks/rosetta/src/protocols/match/MatchSet.hh
symlinks/rosetta/src/protocols/match/MatchSet.cc

Public Types

Public Member Functions

Private Attributes

Detailed Description

Member Typedef Documentation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation