protocols::sic_dock::XfoxmScore Struct Reference

#include <designability_score.hh>

Public Member Functions
	XfoxmScore (std::string datadir)
void	fillarray (char *a, std::string fname)
void	makebinary (char *a, std::string fname)
float	score (Xform const &s1, Xform const &s2, char ss1, char ss2) const
float	score (core::pose::Pose const &pose, platform::Size rsd1, platform::Size rsd2) const
float	score (core::pose::Pose &pose, bool compute_ss=true) const
float	score (core::pose::Pose const &pose) const

Public Attributes
char *	hh
char *	he
char *	hl
char *	ee
char *	el
char *	ll

Constructor & Destructor Documentation

protocols::sic_dock::XfoxmScore::XfoxmScore

(

std::string

datadir

)

References ee, el, fillarray(), he, hh, hl, and ll.

Member Function Documentation

void protocols::sic_dock::XfoxmScore::fillarray	(	char *	a,
		std::string	fname
	)

References utility::io::izstream::close(), utility::io::izstream::good(), in, utility::io::izstream::read(), and utility_exit_with_message.

Referenced by XfoxmScore().

void protocols::sic_dock::XfoxmScore::makebinary	(	char *	a,
		std::string	fname
	)

References utility::io::izstream::close(), utility::io::ozstream::close(), utility::io::izstream::good(), in, log(), max(), min, out, utility_exit_with_message, and utility::io::ozstream::write().

float protocols::sic_dock::XfoxmScore::score	(	Xform const &	s1,
		Xform const &	s2,
		char	ss1,
		char	ss2
	)		const

References ee, protocols::sic_dock::get_xform_stats(), he, hh, min, numeric::constants::d::pi_2, pi_2, and utility_exit_with_message.

Referenced by score().

float protocols::sic_dock::XfoxmScore::score	(	core::pose::Pose const &	pose,
		platform::Size	rsd1,
		platform::Size	rsd2
	)		const

References numeric::xyzVector< class >::distance_squared(), core::conformation::Residue::has(), core::conformation::Residue::is_protein(), core::pose::Pose::residue(), score(), core::pose::Pose::secstruct(), and core::conformation::Residue::xyz().

float protocols::sic_dock::XfoxmScore::score	(	core::pose::Pose &	pose,
		bool	compute_ss = true
	)		const

References dssp, core::scoring::dssp::Dssp::insert_ss_into_pose(), core::pose::Pose::n_residue(), s1, s2, and score().

float protocols::sic_dock::XfoxmScore::score

(

core::pose::Pose const &

pose

)

const

References core::pose::Pose::n_residue(), s1, s2, and score().

Member Data Documentation

char * protocols::sic_dock::XfoxmScore::ee

Referenced by score(), and XfoxmScore().

char * protocols::sic_dock::XfoxmScore::el

Referenced by XfoxmScore().

char * protocols::sic_dock::XfoxmScore::he

Referenced by score(), and XfoxmScore().

char* protocols::sic_dock::XfoxmScore::hh

Referenced by score(), and XfoxmScore().

char * protocols::sic_dock::XfoxmScore::hl

Referenced by XfoxmScore().

char * protocols::sic_dock::XfoxmScore::ll

Referenced by XfoxmScore().

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The documentation for this struct was generated from the following files:

• symlinks/rosetta/src/protocols/sic_dock/designability_score.hh
• symlinks/rosetta/src/protocols/sic_dock/designability_score.cc