| add_constraint(core::scoring::constraints::ConstraintCOP cst) | protocols::forge::remodel::RemodelConstraintGenerator | protected |
| add_constraints(core::scoring::constraints::ConstraintCOPs csts) | protocols::forge::remodel::RemodelConstraintGenerator | protected |
| add_remodel_constraints_to_pose(core::pose::Pose &pose) | protocols::forge::remodel::RemodelConstraintGenerator | |
| add_rv_info(ResidueVicinityInfoOP rv_info) | protocols::forge::remodel::ResidueVicinityRCG | inline |
| apply(core::pose::Pose &pose) | protocols::forge::remodel::RemodelConstraintGenerator | virtual |
| protocols::moves::Mover::apply(core::io::serialization::PipeMap &pmap) | protocols::moves::Mover | virtual |
| clear_constraints() | protocols::forge::remodel::RemodelConstraintGenerator | protected |
| clear_info() | protocols::moves::Mover | inlinevirtual |
| clear_rv_infos() | protocols::forge::remodel::ResidueVicinityRCG | inline |
| clear_stored_constraints() | protocols::forge::remodel::RemodelConstraintGenerator | protected |
| clone() const | protocols::forge::remodel::ResidueVicinityRCG | virtual |
| create() | protocols::moves::Mover | virtual |
| Filters_map typedef | protocols::moves::Mover | |
| fresh_instance() const | protocols::forge::remodel::ResidueVicinityRCG | virtual |
| generate_remodel_constraints(core::pose::Pose const &pose) | protocols::forge::remodel::ResidueVicinityRCG | virtual |
| generate_remodel_constraints_for_respair(core::pose::Pose const &pose, core::Size const loopres, ResidueVicinityInfo const &rv_info, utility::vector1< core::scoring::constraints::ConstraintCOP > &csts) | protocols::forge::remodel::ResidueVicinityRCG | protected |
| get_additional_output() | protocols::moves::Mover | virtual |
| get_current_job() const | protocols::moves::Mover | |
| get_current_tag() const | protocols::moves::Mover | inline |
| get_input_pose() const | protocols::moves::Mover | |
| get_last_move_status() const | protocols::moves::Mover | |
| get_name() const | protocols::forge::remodel::ResidueVicinityRCG | virtual |
| get_native_pose() const | protocols::moves::Mover | |
| get_type() const | protocols::moves::Mover | inline |
| id() const | protocols::forge::remodel::RemodelConstraintGenerator | |
| info() | protocols::moves::Mover | inlinevirtual |
| info() const | protocols::moves::Mover | inlinevirtual |
| init(core::pose::Pose const &) | protocols::forge::remodel::RemodelConstraintGenerator | inlinevirtual |
| last_proposal_density_ratio() | protocols::moves::Mover | inlinevirtual |
| lookup_stored_constraints(std::string const &id) | protocols::forge::remodel::RemodelConstraintGenerator | static |
| lstart(core::Size const lstart) | protocols::forge::remodel::ResidueVicinityRCG | |
| lstart_ | protocols::forge::remodel::ResidueVicinityRCG | private |
| lstop(core::Size const lstop) | protocols::forge::remodel::ResidueVicinityRCG | |
| lstop_ | protocols::forge::remodel::ResidueVicinityRCG | private |
| Mover() | protocols::moves::Mover | |
| Mover(std::string const &type_name) | protocols::moves::Mover | |
| Mover(Mover const &other) | protocols::moves::Mover | |
| name() | protocols::moves::Mover | inlinestatic |
| operator=(Mover const &other) | protocols::moves::Mover | |
| parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks, MoverCacheSP cache) | protocols::moves::Mover | virtual |
| parse_my_tag(TagCOP tag, basic::datacache::DataMap &data, protocols::filters::Filters_map const &filters, protocols::moves::Movers_map const &movers, core::pose::Pose const &pose) | protocols::forge::remodel::ResidueVicinityRCG | virtual |
| parse_state(SerializableState const &state) | protocols::moves::Mover | virtual |
| Pose typedef | protocols::moves::Mover | |
| PoseCOP typedef | protocols::moves::Mover | |
| register_options() | protocols::moves::Mover | inlinestatic |
| reinitialize_for_each_job() const | protocols::moves::Mover | virtual |
| reinitialize_for_new_input() const | protocols::moves::Mover | virtual |
| RemodelConstraintGenerator() | protocols::forge::remodel::RemodelConstraintGenerator | |
| RemodelConstraintGenerator(RemodelConstraintGenerator const &rval) | protocols::forge::remodel::RemodelConstraintGenerator | |
| remove_remodel_constraints_from_pose(core::pose::Pose &pose) const | protocols::forge::remodel::RemodelConstraintGenerator | |
| reset_status() | protocols::moves::Mover | |
| ResidueVicinityRCG() | protocols::forge::remodel::ResidueVicinityRCG | |
| ResidueVicinityRCG(ResidueVicinityRCG const &rval) | protocols::forge::remodel::ResidueVicinityRCG | |
| ResidueVicinityRCG(core::Size lstart, core::Size lstop, utility::vector1< ResidueVicinityInfoOP > const &rv_infos) | protocols::forge::remodel::ResidueVicinityRCG | |
| rv_infos_ | protocols::forge::remodel::ResidueVicinityRCG | private |
| save_state(SerializableState &state) | protocols::moves::Mover | virtual |
| seqmap() const | protocols::forge::remodel::RemodelConstraintGenerator | |
| set_current_job(protocols::jobdist::BasicJobCOP job) | protocols::moves::Mover | |
| set_current_tag(std::string const &new_tag) | protocols::moves::Mover | inline |
| set_id(std::string const &id) | protocols::forge::remodel::RemodelConstraintGenerator | |
| set_input_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_last_move_status(MoverStatus status) | protocols::moves::Mover | protected |
| set_native_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_rv_infos(utility::vector1< ResidueVicinityInfoOP > const &rv_infos) | protocols::forge::remodel::ResidueVicinityRCG | |
| set_seqmap(core::id::SequenceMappingCOP seqmap) | protocols::forge::remodel::RemodelConstraintGenerator | |
| set_vlb(VarLengthBuildAP vlb) | protocols::forge::remodel::RemodelConstraintGenerator | |
| show(std::ostream &output=std::cout) const | protocols::moves::Mover | virtual |
| store_constraints() | protocols::forge::remodel::RemodelConstraintGenerator | protected |
| Strings typedef | protocols::moves::Mover | |
| TagCOP typedef | protocols::moves::Mover | |
| test_move(Pose &pose) | protocols::moves::Mover | inlinevirtual |
| type() const | protocols::moves::Mover | inline |
| type(const std::string &type_in) | protocols::moves::Mover | inline |
| VarLengthBuildAP typedef | protocols::forge::remodel::RemodelConstraintGenerator | |
| vlb() const | protocols::forge::remodel::RemodelConstraintGenerator | |
| ~Mover() | protocols::moves::Mover | virtual |
| ~RemodelConstraintGenerator() | protocols::forge::remodel::RemodelConstraintGenerator | virtual |
| ~ResidueVicinityRCG() | protocols::forge::remodel::ResidueVicinityRCG | virtual |
1.8.7