| aa1() const | protocols::motif_hash::ResPairMotif | |
| aa1_ | protocols::motif_hash::ResPairMotif | private |
| aa2() const | protocols::motif_hash::ResPairMotif | |
| aa2_ | protocols::motif_hash::ResPairMotif | private |
| addcount() | protocols::motif_hash::ResPairMotif | inline |
| bfac1() const | protocols::motif_hash::ResPairMotif | |
| bfac1(Real const &bfac1) | protocols::motif_hash::ResPairMotif | |
| bfac1_ | protocols::motif_hash::ResPairMotif | private |
| bfac2() const | protocols::motif_hash::ResPairMotif | |
| bfac2(Real const &bfac2) | protocols::motif_hash::ResPairMotif | |
| bfac2_ | protocols::motif_hash::ResPairMotif | private |
| chain1_ | protocols::motif_hash::ResPairMotif | private |
| chain2_ | protocols::motif_hash::ResPairMotif | private |
| chi11() const | protocols::motif_hash::ResPairMotif | |
| chi12() const | protocols::motif_hash::ResPairMotif | |
| chi13() const | protocols::motif_hash::ResPairMotif | |
| chi14() const | protocols::motif_hash::ResPairMotif | |
| chi1_ | protocols::motif_hash::ResPairMotif | private |
| chi21() const | protocols::motif_hash::ResPairMotif | |
| chi22() const | protocols::motif_hash::ResPairMotif | |
| chi23() const | protocols::motif_hash::ResPairMotif | |
| chi24() const | protocols::motif_hash::ResPairMotif | |
| chi2_ | protocols::motif_hash::ResPairMotif | private |
| count() const | protocols::motif_hash::ResPairMotif | inline |
| count(Size const &count) | protocols::motif_hash::ResPairMotif | inline |
| count_ | protocols::motif_hash::ResPairMotif | private |
| dist2() const | protocols::motif_hash::ResPairMotif | |
| dssp1() const | protocols::motif_hash::ResPairMotif | |
| dssp2() const | protocols::motif_hash::ResPairMotif | |
| dump_aligned_motif(std::ostream &out, Pose const &pose1, Size const &ir, Pose const &pose2, Size const &jr, int const &num=1) const | protocols::motif_hash::ResPairMotif | |
| dump_aligned_motif(std::ostream &out, Pose const &pose, Size const &ir, Size const &jr, int const &num=1) const | protocols::motif_hash::ResPairMotif | |
| dump_aligned_motif_break(std::ostream &out, Pose const &pose1, Size const &ir, Pose const &pose2, Size const &jr, int const &num=1) const | protocols::motif_hash::ResPairMotif | |
| dump_aligned_motif_super(std::ostream &out, Pose const &pose1, Size const &ir, Pose const &pose2, Size const &jr, int const &num=1) const | protocols::motif_hash::ResPairMotif | |
| dump_pdb(std::string const &fname, std::string const &tag="1") const | protocols::motif_hash::ResPairMotif | |
| dump_pdb(std::ostream &out, numeric::xyzTransform< Real > const &xform, std::string const &tag="1") const | protocols::motif_hash::ResPairMotif | |
| fa_atr() const | protocols::motif_hash::ResPairMotif | |
| fa_atr(Real const &fa_atr) | protocols::motif_hash::ResPairMotif | |
| fa_atr_ | protocols::motif_hash::ResPairMotif | private |
| fill_pose_with_motif(Pose &pose, int ir=1, int jr=2) const | protocols::motif_hash::ResPairMotif | |
| filter() const | protocols::motif_hash::ResPairMotif | |
| hb_bb() const | protocols::motif_hash::ResPairMotif | |
| hb_bb(Real const &hb_bb) | protocols::motif_hash::ResPairMotif | |
| hb_bb_ | protocols::motif_hash::ResPairMotif | private |
| hb_bb_sc() const | protocols::motif_hash::ResPairMotif | |
| hb_bb_sc(Real const &hb_bb_sc) | protocols::motif_hash::ResPairMotif | |
| hb_bb_sc_ | protocols::motif_hash::ResPairMotif | private |
| hb_sc() const | protocols::motif_hash::ResPairMotif | |
| hb_sc(Real const &hb_sc) | protocols::motif_hash::ResPairMotif | |
| hb_sc_ | protocols::motif_hash::ResPairMotif | private |
| ht() const | protocols::motif_hash::ResPairMotif | |
| ht(numeric::HomogeneousTransform< Real > const &h) | protocols::motif_hash::ResPairMotif | |
| lg1x_ | protocols::motif_hash::ResPairMotif | private |
| lg1y_ | protocols::motif_hash::ResPairMotif | private |
| lg1z_ | protocols::motif_hash::ResPairMotif | private |
| lg2x_ | protocols::motif_hash::ResPairMotif | private |
| lg2y_ | protocols::motif_hash::ResPairMotif | private |
| lg2z_ | protocols::motif_hash::ResPairMotif | private |
| misc1_ | protocols::motif_hash::ResPairMotif | private |
| misc2_ | protocols::motif_hash::ResPairMotif | private |
| misc3_ | protocols::motif_hash::ResPairMotif | private |
| misc4_ | protocols::motif_hash::ResPairMotif | private |
| misc5_ | protocols::motif_hash::ResPairMotif | private |
| nbrs() const | protocols::motif_hash::ResPairMotif | |
| nbrs(Real const &nbrs) | protocols::motif_hash::ResPairMotif | |
| nbrs_ | protocols::motif_hash::ResPairMotif | private |
| operator<<(std::ostream &out, ResPairMotif const &x) | protocols::motif_hash::ResPairMotif | friend |
| pdb_ | protocols::motif_hash::ResPairMotif | |
| print_header(std::ostream &out) | protocols::motif_hash::ResPairMotif | static |
| reset() | protocols::motif_hash::ResPairMotif | |
| resi1_ | protocols::motif_hash::ResPairMotif | |
| resi2_ | protocols::motif_hash::ResPairMotif | |
| ResPairMotif() | protocols::motif_hash::ResPairMotif | |
| ResPairMotif(std::string const &tag, core::pose::Pose const &pose, Real6 const &xform, Size const &resi1, Size const &resi2, Real const &sasa, Real const &nbrs, Real const &fa_atr, Real const &hb_sc, Real const &hb_bb_sc, Real const &hb_bb, Real const &bfac1, Real const &bfac2, bool is_sspaired) | protocols::motif_hash::ResPairMotif | |
| reverse_in_place() | protocols::motif_hash::ResPairMotif | |
| rt() const | protocols::motif_hash::ResPairMotif | |
| rt(Real6 const &rt) | protocols::motif_hash::ResPairMotif | |
| rt6_ | protocols::motif_hash::ResPairMotif | private |
| sasa() const | protocols::motif_hash::ResPairMotif | |
| sasa(Real const &sasa) | protocols::motif_hash::ResPairMotif | |
| sasa_ | protocols::motif_hash::ResPairMotif | private |
| ss1() const | protocols::motif_hash::ResPairMotif | |
| ss1_ | protocols::motif_hash::ResPairMotif | private |
| ss2() const | protocols::motif_hash::ResPairMotif | |
| ss2_ | protocols::motif_hash::ResPairMotif | private |
1.8.7