protocols::scoring::methods::InterchainPairEnergy Class Reference

#include <InterchainPairEnergy.hh>

Public Types
typedef core::scoring::methods::ContextIndependentTwoBodyEnergy	parent

Public Member Functions
	InterchainPairEnergy ()
	c-tor More...
virtual core::scoring::methods::EnergyMethodOP	clone () const
	clone More...
virtual void	setup_for_scoring (core::pose::Pose &pose, core::scoring::ScoreFunction const &) const
virtual void	residue_pair_energy (core::conformation::Residue const &rsd1, core::conformation::Residue const &rsd2, core::pose::Pose const &, core::scoring::ScoreFunction const &, core::scoring::EnergyMap &emap) const
	calculate the pair_score between chains More...
virtual void	finalize_total_energy (core::pose::Pose &pose, core::scoring::ScoreFunction const &, core::scoring::EnergyMap &) const
virtual bool	defines_intrares_energy (core::scoring::EnergyMap const &) const
	This method should admit to defining intraresidue energies. More...
void	eval_intrares_energy (core::conformation::Residue const &, core::pose::Pose const &, core::scoring::ScoreFunction const &, core::scoring::EnergyMap &) const
virtual core::Distance	atomic_interaction_cutoff () const
	Energy distance cutoff. More...
virtual void	indicate_required_context_graphs (utility::vector1< bool > &) const

Private Member Functions
virtual core::Size	version () const

Private Attributes
protocols::scoring::InterchainPotential const *	potential_

Member Typedef Documentation

typedef core::scoring::methods::ContextIndependentTwoBodyEnergy protocols::scoring::methods::InterchainPairEnergy::parent

Constructor & Destructor Documentation

protocols::scoring::methods::InterchainPairEnergy::InterchainPairEnergy

(

)

c-tor

Referenced by clone().

Member Function Documentation

core::Distance protocols::scoring::methods::InterchainPairEnergy::atomic_interaction_cutoff ( ) const

virtual

Energy distance cutoff.

core::scoring::methods::EnergyMethodOP protocols::scoring::methods::InterchainPairEnergy::clone ( ) const

virtual

clone

References InterchainPairEnergy().

virtual bool protocols::scoring::methods::InterchainPairEnergy::defines_intrares_energy ( core::scoring::EnergyMap const &  ) const

inlinevirtual

This method should admit to defining intraresidue energies.

void protocols::scoring::methods::InterchainPairEnergy::eval_intrares_energy ( core::conformation::Residue const &  , core::pose::Pose const &  , core::scoring::ScoreFunction const &  , core::scoring::EnergyMap &    ) const

inline

void protocols::scoring::methods::InterchainPairEnergy::finalize_total_energy ( core::pose::Pose &  pose, core::scoring::ScoreFunction const &  , core::scoring::EnergyMap &    ) const

virtual

References protocols::scoring::InterchainPotential::finalize(), and potential_.

virtual void protocols::scoring::methods::InterchainPairEnergy::indicate_required_context_graphs ( utility::vector1< bool > &  ) const

inlinevirtual

void protocols::scoring::methods::InterchainPairEnergy::residue_pair_energy ( core::conformation::Residue const &  rsd1, core::conformation::Residue const &  rsd2, core::pose::Pose const &  pose, core::scoring::ScoreFunction const &  , core::scoring::EnergyMap &  emap  ) const

virtual

calculate the pair_score between chains

References protocols::scoring::InterchainPotential::evaluate_pair_and_vdw_score(), interchain_pair, interchain_vdw, and potential_.

void protocols::scoring::methods::InterchainPairEnergy::setup_for_scoring ( core::pose::Pose &  pose, core::scoring::ScoreFunction const &    ) const

virtual

References core::scoring::EnvPairPotential::compute_centroid_environment(), protocols::scoring::InterchainPotential::compute_interface(), potential_, and core::pose::Pose::update_residue_neighbors().

core::Size protocols::scoring::methods::InterchainPairEnergy::version ( ) const

privatevirtual

Member Data Documentation

protocols::scoring::InterchainPotential const* protocols::scoring::methods::InterchainPairEnergy::potential_

private

Referenced by finalize_total_energy(), residue_pair_energy(), and setup_for_scoring().

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The documentation for this class was generated from the following files:

• symlinks/rosetta/src/protocols/scoring/methods/InterchainPairEnergy.hh
• symlinks/rosetta/src/protocols/scoring/methods/InterchainPairEnergy.cc