| BOTH_SC_AND_BB enum value | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | |
| cast_flexbb_edge(EdgeBase const *edge) const | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | inlineprotected |
| cast_flexbb_edge(EdgeBase *edge) | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | inlineprotected |
| commit_considered_backbone_move(ObjexxFCL::FArray1_int &rotamer_on_node)=0 | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | pure virtual |
| COMMIT_LIMIT_BETWEEN_UPDATES | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | privatestatic |
| consider_backbone_move(int bb_id, core::PackerEnergy &delta_energy, core::PackerEnergy &prev_flexseg_energy, bool &valid_motion, int &num_nodes_changing_state)=0 | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | pure virtual |
| consider_bbmove_w_state_substitution(int node_ind, int new_state, core::PackerEnergy &delta_energy, core::PackerEnergy &prev_energy_for_flexseg, bool &valid_motion, int &num_nodes_changing_state)=0 | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | pure virtual |
| count_dynamic_memory() const | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | virtual |
| EdgeBase typedef | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | |
| enforce_bb_contiguity_ | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | private |
| find_flexbb_edge(int node1, int node2) const | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | inlineprotected |
| find_flexbb_edge(int node1, int node2) | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | inlineprotected |
| FlexbbInteractionGraph(int num_nodes) | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | |
| FlexbbInteractionGraph() | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | private |
| FlexbbInteractionGraph(FlexbbInteractionGraph const &) | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | private |
| flexseg_bb_offset_ | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | private |
| flexseg_considering_alt_bb() const | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | inlineprotected |
| flexseg_considering_alt_bb_ | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | private |
| flexseg_for_bb_ | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | private |
| flexseg_for_moltenres(int moltenres) const | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | inlineprotected |
| flexseg_for_moltenres_ | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | private |
| flexseg_members(int flexseg) const | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | inline |
| flexseg_members_ | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | private |
| get_accessible_states(Subsitution move_mode, utility::vector1< Size > &rotlist) const | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | |
| get_backbone_currently_assigned(int bbid) const | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | |
| get_backbone_list(utility::vector1< Size > &bblist) const | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | |
| get_bb_for_state(int node, int state) const | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | |
| get_enforce_bb_contiguity() const | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | |
| get_flexbb_node(int index) const | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | inlineprotected |
| get_flexbb_node(int index) | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | inlineprotected |
| get_flexseg_bb_offset(int flexseg_id) const | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | inline |
| get_flexseg_for_bb(int bb) const | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | inline |
| get_num_aa_types() const | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | inline |
| get_num_nodes_changing_state() const | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | protected |
| get_num_states_per_backbone_for_node(int node, int bb) const | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | |
| increment_count_nodes_in_flexseg() | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | |
| initialize(core::pack::rotamer_set::RotamerSetsBase const &rot_sets) | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | virtual |
| last_considered_backbone_sub_unresolved() const | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | inlineprotected |
| last_considered_backbone_sub_unresolved_ | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | private |
| last_considered_backbone_sub_valid() const | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | inlineprotected |
| last_considered_backbone_sub_valid_ | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | private |
| last_considered_fixedbb_sub_unresolved_ | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | private |
| last_considered_substitution_kept_backbone_fixed() const | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | inlineprotected |
| last_considered_substitution_moved_the_backbone() const | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | inlineprotected |
| last_considered_substitution_unresolved() const | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | inlineprotected |
| last_sub_attempted_backbone_move_ | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | private |
| node_considering_alt_state() const | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | inlineprotected |
| node_considering_alt_state_ | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | private |
| nodes_from_same_flexseg(int node1, int node2) const | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | |
| note_bbjump_substitution() | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | inlineprotected |
| note_fixedbb_substitution() | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | inlineprotected |
| note_last_considered_substitution_resolved() | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | protected |
| num_aa_types_ | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | private |
| num_bb_alternatives_for_flexseg_ | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | private |
| num_commits_since_last_update_ | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | private |
| num_flexible_segments_ | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | private |
| num_nodes_changing_state_ | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | private |
| num_total_bb_ | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | private |
| PackerEnergy typedef | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | |
| parent typedef | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | |
| reset_node_in_moving_flexseg_count() | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | protected |
| SC_ONLY enum value | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | |
| set_aatypes_for_node(int node_ind, utility::vector1< int > const &aatypes) | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | private |
| set_closest_states_on_other_bbs(int node_index, ObjexxFCL::FArray2D_int const &) | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | private |
| set_enforce_bb_contiguity(bool) | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | protected |
| set_flexseg_considering_alt_bb(int setting) | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | inlineprotected |
| set_last_considered_backbone_sub_valid(bool setting) | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | inlineprotected |
| set_node_considering_alt_state(int setting) | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | inlineprotected |
| set_num_bb_for_node(int node, int numbb) | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | private |
| set_num_flexsegs(int num_flexsegs) | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | private |
| set_num_states_per_backbone_for_node(int node, utility::vector1< int > const &states_per_bb) | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | private |
| set_total_energy_alternate_state_assignment(PackerEnergy setting) | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | inlineprotected |
| set_total_energy_current_state_assignment(PackerEnergy setting) | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | protected |
| set_total_num_backbones(int num_backbones) | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | private |
| Subsitution enum name | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | |
| total_energy_alternate_state_assignment() const | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | inlineprotected |
| total_energy_alternate_state_assignment_ | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | private |
| total_energy_current_state_assignment() const | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | inlineprotected |
| total_energy_current_state_assignment_ | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | private |
| update_internal_energy_totals() | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | protectedvirtual |
| ~FlexbbInteractionGraph() | protocols::flexpack::interaction_graph::FlexbbInteractionGraph | virtual |
1.8.7