StepWiseRNA_ConnectionSampler.cc File Reference

#include <protocols/stepwise/sampling/rna/connection/StepWiseRNA_ConnectionSampler.hh>
#include <protocols/stepwise/sampling/rna/StepWiseRNA_JobParameters.hh>
#include <protocols/stepwise/sampling/rna/StepWiseRNA_PoseSelection.hh>
#include <protocols/stepwise/sampling/rna/StepWiseRNA_Util.hh>
#include <protocols/stepwise/sampling/rna/StepWiseRNA_OutputData.hh>
#include <protocols/stepwise/sampling/rna/StepWiseRNA_ResidueSampler.hh>
#include <protocols/stepwise/sampling/rna/StepWiseRNA_ModelerOptions.hh>
#include <protocols/stepwise/sampling/rna/checker/AtrRepChecker.hh>
#include <protocols/stepwise/sampling/rna/checker/RNA_BaseCentroidChecker.hh>
#include <protocols/stepwise/sampling/rna/checker/RNA_VDW_BinChecker.hh>
#include <protocols/stepwise/sampling/rna/checker/ChainClosableGeometryChecker.hh>
#include <protocols/stepwise/sampling/rna/checker/ChainClosureChecker.hh>
#include <protocols/stepwise/sampling/rna/o2prime/O2PrimePacker.hh>
#include <protocols/stepwise/sampling/rna/phosphate/MultiPhosphateSampler.hh>
#include <protocols/stepwise/sampling/rna/phosphate/PhosphateUtil.hh>
#include <protocols/stepwise/sampling/rna/rigid_body/StepWiseRNA_FloatingBaseSamplerUtil.hh>
#include <protocols/stepwise/sampling/rna/sugar/StepWiseRNA_VirtualSugarUtil.hh>
#include <protocols/stepwise/screener/AtrRepScreener.hh>
#include <protocols/stepwise/screener/BaseBinMapUpdater.hh>
#include <protocols/stepwise/screener/BaseCentroidScreener.hh>
#include <protocols/stepwise/screener/BulgeApplier.hh>
#include <protocols/stepwise/screener/CentroidDistanceScreener.hh>
#include <protocols/stepwise/screener/ChainClosableGeometryScreener.hh>
#include <protocols/stepwise/screener/ChainClosableGeometryResidueBasedScreener.hh>
#include <protocols/stepwise/screener/ChainClosureScreener.hh>
#include <protocols/stepwise/screener/FastForwardToNextRigidBody.hh>
#include <protocols/stepwise/screener/FastForwardToNextResidueAlternative.hh>
#include <protocols/stepwise/screener/IntegrationTestBreaker.hh>
#include <protocols/stepwise/screener/NativeRMSD_Screener.hh>
#include <protocols/stepwise/screener/O2PrimeScreener.hh>
#include <protocols/stepwise/screener/PhosphateScreener.hh>
#include <protocols/stepwise/screener/PoseSelectionScreener.hh>
#include <protocols/stepwise/screener/ResidueContactScreener.hh>
#include <protocols/stepwise/screener/SampleApplier.hh>
#include <protocols/stepwise/screener/StubApplier.hh>
#include <protocols/stepwise/screener/StubDistanceScreener.hh>
#include <protocols/stepwise/screener/SugarInstantiator.hh>
#include <protocols/stepwise/screener/StepWiseScreener.hh>
#include <protocols/stepwise/screener/TagDefinition.hh>
#include <protocols/stepwise/screener/VDW_BinScreener.hh>
#include <protocols/stepwise/StepWiseSampleAndScreen.hh>
#include <protocols/stepwise/StepWiseUtil.hh>
#include <protocols/rotamer_sampler/RotamerBase.hh>
#include <protocols/rotamer_sampler/RotamerComb.hh>
#include <protocols/rotamer_sampler/rna/RNA_RotamerSamplerUtil.hh>
#include <protocols/rotamer_sampler/rigid_body/FloatingBaseUtil.hh>
#include <protocols/rotamer_sampler/rigid_body/RigidBodyRotamer.hh>
#include <protocols/rotamer_sampler/rigid_body/RigidBodyRotamerWithResidueAlternatives.hh>
#include <protocols/rotamer_sampler/copy_dofs/ResidueAlternativeRotamer.hh>
#include <protocols/rotamer_sampler/copy_dofs/ResidueAlternativeRotamerComb.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/ScoreType.hh>
#include <core/chemical/rna/RNA_Util.hh>
#include <core/chemical/VariantType.hh>
#include <core/kinematics/Stub.hh>
#include <core/pose/rna/RNA_Util.hh>
#include <core/pose/Pose.hh>
#include <core/pose/util.hh>
#include <core/pose/full_model_info/FullModelInfoUtil.hh>
#include <core/types.hh>
#include <ObjexxFCL/format.hh>
#include <ObjexxFCL/string.functions.hh>
#include <utility/tools/make_vector1.hh>
#include <numeric/xyz.functions.hh>
#include <basic/Tracer.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::stepwise
	protocols::stepwise::sampling
	protocols::stepwise::sampling::rna
	protocols::stepwise::sampling::rna::connection

Variables
static basic::Tracer	TR ("protocols.stepwise.sampling.rna.connection.StepWiseRNA_ConnectionSampler")

Variable Documentation

basic::Tracer TR("protocols.stepwise.sampling.rna.connection.StepWiseRNA_ConnectionSampler")

static