- f -

• FA1Dd : protocols::toolbox::KClusterData
• FA2d : protocols::toolbox::KCluster , protocols::toolbox::KClusterData
• FA2Dd : protocols::toolbox::KCluster , protocols::toolbox::KClusterData
• FA2Pd : protocols::toolbox::KCluster , protocols::toolbox::KClusterData
• FA3Pd : protocols::toolbox::KClusterData
• FArray1D_int : protocols::fldsgn::potentials::sspot::HSPairPotential , protocols::fldsgn::potentials::sspot::NatbiasStrandPairPotential , protocols::fldsgn::potentials::sspot::SSPairPotential
• FArray1D_real : protocols::fldsgn::potentials::sspot::HSPairPotential , protocols::fldsgn::potentials::sspot::NatbiasStrandPairPotential , protocols::fldsgn::potentials::sspot::SSPairPotential
• FArray2D_PackerEnergy : protocols::flexpack::interaction_graph::OTFFlexbbEdge
• FArray4D_real : protocols::fldsgn::potentials::sspot::HSPairPotential , protocols::fldsgn::potentials::sspot::NatbiasStrandPairPotential , protocols::fldsgn::potentials::sspot::SSPairPotential
• FASTERInteractionGraphOP : protocols::pack_daemon::FASTER_IG_Repacker
• FeaturesReporterCreatorMap : protocols::features::FeaturesReporterFactory
• FeaturesReporters : protocols::features::Report
• FileList : protocols::comparative_modeling::ThreadingJobInputter
• Filenames : protocols::jd2::MpiFileBuffer
• FileNames : protocols::motifs::MotifLibrary
• Filter : protocols::enzdes::DiffAtomSasaFilter , protocols::enzdes::EnzdesScorefileFilter , protocols::enzdes::EnzScoreFilter , protocols::enzdes::LigBurialFilter , protocols::enzdes::LigDSasaFilter , protocols::enzdes::LigInterfaceEnergyFilter , protocols::enzdes::RemoveLigandFilter , protocols::enzdes::RepackWithoutLigandFilter , protocols::enzdes::ResidueConformerFilter , protocols::fldsgn::filters::CoreDunbrackFilter , protocols::fldsgn::filters::FragQualFilter , protocols::fldsgn::filters::HelixKinkFilter , protocols::fldsgn::filters::HelixPairingFilter , protocols::fldsgn::filters::HSSTripletFilter , protocols::fldsgn::filters::InterlockingAromaFilter , protocols::fldsgn::filters::NcontactsFilter , protocols::fldsgn::filters::ParallelBetaPairingPreferenceFilter , protocols::fldsgn::filters::SecondaryStructureCountFilter , protocols::fldsgn::filters::SecondaryStructureFilter , protocols::fldsgn::filters::SheetTopologyFilter , protocols::simple_filters::ConservedPosMutationFilter , protocols::simple_filters::HolesFilter , protocols::simple_filters::PackStatFilter , protocols::simple_filters::RangeFilter , protocols::simple_filters::ShapeComplementarityFilter
• FilterList : protocols::filters::CombinedFilter
• FilterMap : protocols::filters::FilterFactory
• FilterOP : protocols::enzdes::DiffAtomSasaFilter , protocols::enzdes::EnzdesScorefileFilter , protocols::enzdes::EnzScoreFilter , protocols::enzdes::LigBurialFilter , protocols::enzdes::LigDSasaFilter , protocols::enzdes::LigInterfaceEnergyFilter , protocols::enzdes::RemoveLigandFilter , protocols::enzdes::RepackWithoutLigandFilter , protocols::enzdes::ResidueConformerFilter , protocols::fldsgn::filters::CoreDunbrackFilter , protocols::fldsgn::filters::FragQualFilter , protocols::fldsgn::filters::HelixKinkFilter , protocols::fldsgn::filters::HelixPairingFilter , protocols::fldsgn::filters::HSSTripletFilter , protocols::fldsgn::filters::InterlockingAromaFilter , protocols::fldsgn::filters::NcontactsFilter , protocols::fldsgn::filters::ParallelBetaPairingPreferenceFilter , protocols::fldsgn::filters::SecondaryStructureCountFilter , protocols::fldsgn::filters::SecondaryStructureFilter , protocols::fldsgn::filters::SheetTopologyFilter , protocols::moves::FilterMover , protocols::simple_filters::ConservedPosMutationFilter , protocols::simple_filters::HolesFilter , protocols::simple_filters::PackStatFilter , protocols::simple_filters::RangeFilter , protocols::simple_filters::ShapeComplementarityFilter , protocols::simple_moves::GenericMonteCarloMover
• Filters_map : protocols::enzdes::DiffAtomSasaFilter , protocols::enzdes::EnzdesScorefileFilter , protocols::enzdes::EnzScoreFilter , protocols::enzdes::LigBurialFilter , protocols::enzdes::LigDSasaFilter , protocols::enzdes::LigInterfaceEnergyFilter , protocols::enzdes::RemoveLigandFilter , protocols::enzdes::RepackWithoutLigandFilter , protocols::enzdes::ResidueConformerFilter , protocols::fldsgn::BluePrintBDR , protocols::fldsgn::CircularPermutation , protocols::fldsgn::filters::CoreDunbrackFilter , protocols::fldsgn::filters::FragQualFilter , protocols::fldsgn::filters::HelixKinkFilter , protocols::fldsgn::filters::HelixPairingFilter , protocols::fldsgn::filters::HSSTripletFilter , protocols::fldsgn::filters::InterlockingAromaFilter , protocols::fldsgn::filters::NcontactsFilter , protocols::fldsgn::filters::ParallelBetaPairingPreferenceFilter , protocols::fldsgn::filters::SecondaryStructureCountFilter , protocols::fldsgn::filters::SecondaryStructureFilter , protocols::fldsgn::filters::SheetTopologyFilter , protocols::fldsgn::MatchResidues , protocols::fldsgn::MatchResiduesMover , protocols::fldsgn::potentials::SetAACompositionPotential , protocols::fldsgn::potentials::SetSecStructEnergies , protocols::flxbb::FlxbbDesign , protocols::flxbb::InterlockAroma , protocols::forge::remodel::RemodelLoopMover , protocols::forge::remodel::RemodelMover , protocols::match::MatcherMover , protocols::moves::DsspMover , protocols::moves::Mover , protocols::simple_filters::HolesFilter , protocols::simple_filters::PackStatFilter , protocols::simple_filters::RangeFilter , protocols::simple_filters::ShapeComplementarityFilter , protocols::simple_moves::GenericMonteCarloMover , protocols::simple_moves::MakePolyXMover , protocols::simple_moves::MonteCarloRecover , protocols::simple_moves::MonteCarloReset , protocols::simple_moves::MonteCarloTest , protocols::toolbox::pose_metric_calculators::FragQualCalculator
• FilterStructsOP : protocols::flxbb::DesignTask , protocols::flxbb::DesignTask_Layer , protocols::flxbb::DesignTask_Normal , protocols::flxbb::FlxbbDesignPack
• FilterWeightPair : protocols::filters::CombinedFilter
• FitnessFunctionOP : protocols::genetic_algorithm::GeneticAlgorithm
• FixedBBInteractionGraphCOP : protocols::pack_daemon::PackDaemon
• FixedBBInteractionGraphOP : protocols::pack_daemon::PackDaemon , protocols::pack_daemon::QuickRepacker
• FloatList : protocols::noesy_assign::FloatingResonance
• FoldTree : protocols::nonlocal::SingleFragmentMover
• FoldTreeOP : protocols::nonlocal::SingleFragmentMover
• FoldTreeSketch : protocols::environment::claims::CutBiasClaim , protocols::environment::claims::TorsionClaim , protocols::environment::claims::VirtResClaim , protocols::environment::EnvClaimBroker
• FormatList : protocols::sparta::GDB
• FragMap : protocols::frags::FragLib
• FragmentMoverOP : protocols::forge::remodel::RemodelLoopMover
• FragmentMoverOPs : protocols::forge::remodel::RemodelLoopMover
• FragSet : protocols::toolbox::pose_metric_calculators::FragQualCalculator
• FragSetCOP : protocols::abinitio::DomainAssembly , protocols::forge::remodel::RemodelLoopMover , protocols::nonlocal::BiasedFragmentMover , protocols::nonlocal::Policy , protocols::nonlocal::SmoothPolicy , protocols::nonlocal::UniformPolicy
• FragSetOP : protocols::abinitio::DomainAssembly , protocols::forge::remodel::RemodelLoopMover , protocols::jd2::parser::FragmentReader , protocols::nonlocal::SingleFragmentMover , protocols::toolbox::pose_metric_calculators::FragQualCalculator
• FragSetOPs : protocols::forge::remodel::RemodelLoopMover
• Frame : protocols::nonlocal::SingleFragmentMover
• FrameList : protocols::forge::components::VarLengthBuild
• FrameMap : protocols::nonlocal::BiasedFragmentMover , protocols::nonlocal::SingleFragmentMover
• FuncFactory : protocols::constraints_additional::SequenceCoupling1BDConstraint , protocols::constraints_additional::SequenceCouplingConstraint
• FuzzyTopology : protocols::abinitio::StrandConstraints