- m -

• M : protocols::sic_dock::Rose
• Mat : protocols::sic_dock::RigidScore
• MatchHash : protocols::match::MatchOutputTracker
• MatchSet : protocols::match::HitHasher
• matrix : protocols::evaluation::PCA
• Matrix : protocols::hotspot_hashing::StubGenerator , protocols::simple_moves::BBGaussianMover
• MC : protocols::sic_dock::Rose
• MCR : protocols::sic_dock::Rose
• MethylNameTable : protocols::noesy_assign::MethylNameLibrary
• MetricValueBase : protocols::fldsgn::NcontactsCalculator , protocols::toolbox::pose_metric_calculators::FragQualCalculator
• MetricValueGetterMap : protocols::multistate_design::MultiStateFitnessFunction
• MetricValueMap : protocols::multistate_design::SingleStateEntityData
• MinimizerOptionsCOP : protocols::normalmode::NormalModeMinimizer , protocols::simple_moves::MinMover
• MinimizerOptionsOP : protocols::normalmode::NormalModeMinimizer , protocols::simple_moves::MinMover
• Model : protocols::abinitio::PairingStatEntry , protocols::abinitio::PairingStatistics
• ModelFreq : protocols::abinitio::PairingStatistics
• ModelList : protocols::abinitio::PairingStatEntry
• ModelWeight : protocols::abinitio::PairingStatistics
• Modified2Original : protocols::forge::build::BuildManager
• MonteCarlo : protocols::forge::remodel::RemodelLoopMover
• Motif : protocols::motif_hash::MotifHash
• MotifMap : protocols::motif_hash::MotifHash
• MoveMap : protocols::fldsgn::CircularPermutation , protocols::forge::build::Bridge , protocols::forge::build::BuildInstruction , protocols::forge::build::BuildManager , protocols::forge::build::ConnectRight , protocols::forge::build::GrowLeft , protocols::forge::build::GrowRight , protocols::forge::build::RelativeConnectRight , protocols::forge::build::SegmentInsert , protocols::forge::build::SegmentRebuild , protocols::forge::build::SegmentSwap , protocols::forge::components::VarLengthBuild , protocols::forge::remodel::RemodelAccumulator , protocols::forge::remodel::RemodelDesignMover , protocols::forge::remodel::RemodelGlobalFrame , protocols::forge::remodel::RemodelLoopMover
• MoveMapOP : protocols::fldsgn::CircularPermutation , protocols::flxbb::FlxbbDesign , protocols::forge::build::BuildManager , protocols::jd2::parser::BluePrint , protocols::loops::loop_mover::LoopMover , protocols::nonlocal::Chunk , protocols::nonlocal::SingleFragmentMover
• Mover : protocols::fldsgn::MatchResidues , protocols::fldsgn::MatchResiduesMover , protocols::jd2::Parser , protocols::nonlocal::SingleFragmentMover
• mover_filter_pair : protocols::rosetta_scripts::ParsedProtocol
• MoverFactory : protocols::rosetta_scripts::RosettaScriptsParser
• MoverFactoryOP : protocols::rosetta_scripts::RosettaScriptsParser
• MoverFilterVector : protocols::rosetta_scripts::ParsedProtocol
• MoverMap : protocols::moves::MoverFactory
• MoverOP : protocols::enzdes::RemoveLigandFilter , protocols::fldsgn::BluePrintBDR , protocols::fldsgn::CircularPermutation , protocols::fldsgn::MatchResidues , protocols::fldsgn::MatchResiduesMover , protocols::fldsgn::potentials::SetAACompositionPotential , protocols::fldsgn::potentials::SetSecStructEnergies , protocols::flxbb::DesignTask , protocols::flxbb::FlxbbDesign , protocols::flxbb::InterlockAroma , protocols::forge::components::BDR , protocols::forge::components::VarLengthBuild , protocols::forge::remodel::RemodelAccumulator , protocols::forge::remodel::RemodelDesignMover , protocols::forge::remodel::RemodelGlobalFrame , protocols::forge::remodel::RemodelLoopMover , protocols::forge::remodel::RemodelMover , protocols::jd2::Parser , protocols::match::MatcherMover , protocols::moves::DsspMover , protocols::moves::FilterMover , protocols::nonlocal::SingleFragmentMover , protocols::simple_moves::ConsensusDesignMover , protocols::simple_moves::GenericMonteCarloMover , protocols::simple_moves::MakePolyXMover , protocols::simple_moves::MonteCarloRecover , protocols::simple_moves::MonteCarloReset , protocols::simple_moves::MonteCarloTest , protocols::simple_moves::RotamerTrialsMover
• MoverPassMap : protocols::environment::EnvClaimBroker
• MoverRealPair : protocols::protein_interface_design::movers::PlaceSimultaneouslyMover
• Movers : protocols::moves::CyclicMover
• Movers_map : protocols::fldsgn::BluePrintBDR , protocols::fldsgn::CircularPermutation , protocols::fldsgn::filters::CoreDunbrackFilter , protocols::fldsgn::filters::FragQualFilter , protocols::fldsgn::filters::HelixKinkFilter , protocols::fldsgn::filters::HelixPairingFilter , protocols::fldsgn::filters::HSSTripletFilter , protocols::fldsgn::filters::InterlockingAromaFilter , protocols::fldsgn::filters::NcontactsFilter , protocols::fldsgn::filters::ParallelBetaPairingPreferenceFilter , protocols::fldsgn::filters::SecondaryStructureCountFilter , protocols::fldsgn::filters::SecondaryStructureFilter , protocols::fldsgn::filters::SheetTopologyFilter , protocols::fldsgn::MatchResidues , protocols::fldsgn::MatchResiduesMover , protocols::fldsgn::potentials::SetAACompositionPotential , protocols::fldsgn::potentials::SetSecStructEnergies , protocols::flxbb::FlxbbDesign , protocols::flxbb::InterlockAroma , protocols::forge::remodel::RemodelLoopMover , protocols::forge::remodel::RemodelMover , protocols::match::MatcherMover , protocols::moves::DsspMover , protocols::simple_filters::HolesFilter , protocols::simple_filters::PackStatFilter , protocols::simple_filters::RangeFilter , protocols::simple_filters::ShapeComplementarityFilter , protocols::simple_moves::GenericMonteCarloMover , protocols::simple_moves::MakePolyXMover , protocols::simple_moves::MonteCarloRecover , protocols::simple_moves::MonteCarloReset , protocols::simple_moves::MonteCarloTest , protocols::toolbox::pose_metric_calculators::FragQualCalculator
• MoverSet : protocols::abinitio::abscript::AbscriptMover , protocols::abinitio::abscript::AbscriptStageMover
• Multivec : protocols::md::MDBase , protocols::optimize_weights::OptEData , protocols::optimize_weights::OptEMultifunc , protocols::optimize_weights::OptEPositionData , protocols::optimize_weights::WrapperOptEMultifunc