- p -

• PackingAngleEnum_start : protocols::antibody
• PackingAngleEnum_total : protocols::antibody
• partner_downstream : protocols::rigid
• partner_upstream : protocols::rigid
• PDB_FILE : protocols::jd2::JobInputterInputSource
• PG_like : protocols::fldsgn::topology
• PHOSPHATE_PACK : protocols::stepwise::screener
• Ploop2x3 : protocols::fldsgn::topology
• Ploop3x3 : protocols::fldsgn::topology
• POSE : protocols::jd2::JobInputterInputSource
• POSE_SELECTION : protocols::stepwise::screener
• prepend : protocols::simple_moves
• prob_native_amino_acid : protocols::optimize_weights
• prob_native_amino_acid_with_unfolded_energy : protocols::optimize_weights
• prob_native_ligand_pose : protocols::optimize_weights
• prob_native_rotamer : protocols::optimize_weights
• prob_native_structure : protocols::optimize_weights
• PRODUCT : protocols::simple_filters
• PROTEIN_ATR_REP : protocols::stepwise::screener
• PROTEIN_BETA_ANTIPARALLEL : protocols::rotamer_sampler
• PROTEIN_FRAGMENT : protocols::rotamer_sampler
• PROTEIN_MAIN_CHAIN : protocols::rotamer_sampler
• PROTEIN_PACK : protocols::stepwise::screener
• pssm_data : protocols::optimize_weights