- c -

• CachingScoringMethodCOP : protocols::frag_picker::scores
• CachingScoringMethodOP : protocols::frag_picker::scores
• CalculatorFilterCOP : protocols::filters
• CalculatorFilterOP : protocols::filters
• CalibrationTypeCumulator : protocols::noesy_assign
• Candidate : protocols::frag_picker , protocols::frag_picker::nonlocal
• Candidates : protocols::frag_picker
• CandidatesCollectorCOP : protocols::frag_picker
• CandidatesCollectorOP : protocols::frag_picker
• CandidatesSink : protocols::frag_picker
• CanonicalSamplingMoverCOP : protocols::canonical_sampling , protocols::moves
• CanonicalSamplingMoverOP : protocols::canonical_sampling , protocols::moves
• CartesianHybridizeCOP : protocols::hybridization
• CartesianHybridizeOP : protocols::hybridization
• CartesianMDCOP : protocols::md
• CartesianMDOP : protocols::md
• CartesianNormalModeMoverCOP : protocols::normalmode
• CartesianNormalModeMoverOP : protocols::normalmode
• CartesianSamplerCOP : protocols::hybridization
• CartesianSamplerOP : protocols::hybridization
• CBScoreCOP : protocols::sic_dock
• CBScoreOP : protocols::sic_dock
• CcdLoopClosureMoverCOP : protocols::loops::loop_closure::ccd
• CcdLoopClosureMoverOP : protocols::loops::loop_closure::ccd
• CcdMoverCOP : protocols::loops::loop_closure::ccd
• CcdMoverOP : protocols::loops::loop_closure::ccd
• CCDMoveWrapperOP : protocols::rbsegment_relax
• CDRClusterCOP : protocols::antibody::clusters
• CDRClusterEnumManagerCOP : protocols::antibody::clusters
• CDRClusterEnumManagerOP : protocols::antibody::clusters
• CDRClusterFeaturesCOP : protocols::antibody::clusters
• CDRClusterFeaturesOP : protocols::antibody::clusters
• CDRClusterMap : protocols::antibody::design
• CDRClusterMatcherCOP : protocols::antibody::clusters
• CDRClusterMatcherOP : protocols::antibody::clusters
• CDRClusterOP : protocols::antibody::clusters
• CDRClusterSetCOP : protocols::antibody::clusters
• CDRClusterSetOP : protocols::antibody::clusters
• CDRH3ModelerCOP : protocols::antibody_legacy
• CDRH3ModelerOP : protocols::antibody_legacy
• CDRSet : protocols::antibody::design
• CDRsMinPackMinCOP : protocols::antibody
• CDRsMinPackMinOP : protocols::antibody
• CentroidDistanceScreenerCOP : protocols::stepwise::screener
• CentroidDistanceScreenerOP : protocols::stepwise::screener
• CentroidRelaxAP : protocols::relax
• CentroidRelaxCAP : protocols::relax
• CentroidRelaxCOP : protocols::relax
• CentroidRelaxMoverOP : protocols::surface_docking
• CentroidRelaxOP : protocols::relax
• ChainClosableGeometryCheckerCOP : protocols::stepwise::sampling::rna::checker
• ChainClosableGeometryCheckerOP : protocols::stepwise::sampling::rna::checker
• ChainClosableGeometryResidueBasedScreenerCOP : protocols::stepwise::screener
• ChainClosableGeometryResidueBasedScreenerOP : protocols::stepwise::screener
• ChainClosableGeometryScreenerCOP : protocols::stepwise::screener
• ChainClosableGeometryScreenerOP : protocols::stepwise::screener
• ChainClosableGeometryStubBasedScreenerCOP : protocols::stepwise::screener
• ChainClosableGeometryStubBasedScreenerOP : protocols::stepwise::screener
• ChainClosureCheckerCOP : protocols::stepwise::sampling::rna::checker
• ChainClosureCheckerOP : protocols::stepwise::sampling::rna::checker
• ChainClosureScreenerCOP : protocols::stepwise::screener
• ChainClosureScreenerOP : protocols::stepwise::screener
• ChainSplitMoverCOP : protocols::simple_moves
• ChainSplitMoverOP : protocols::simple_moves
• ChangeFoldTreeMoverCOP : protocols::moves
• ChangeFoldTreeMoverOP : protocols::moves
• ChargeChargeFeaturesCOP : protocols::features
• ChargeChargeFeaturesOP : protocols::features
• CheckPointerCOP : protocols::checkpoint
• CheckPointerOP : protocols::checkpoint
• ChiralMoverCOP : protocols::simple_moves::chiral
• ChiralMoverOP : protocols::simple_moves::chiral
• ChunkCOP : protocols::nonlocal
• ChunkOP : protocols::nonlocal
• ChunkSetOP : protocols::farna
• ChunkTrialMoverCOP : protocols::hybridization
• ChunkTrialMoverOP : protocols::hybridization
• CircularPermutation_AP : protocols::fldsgn
• CircularPermutation_CAP : protocols::fldsgn
• CircularPermutation_COP : protocols::fldsgn
• CircularPermutation_OP : protocols::fldsgn
• ClaimerMessageAP : protocols::topology_broker
• ClaimerMessageCAP : protocols::topology_broker
• ClaimerMessageCOP : protocols::topology_broker
• ClaimerMessageOP : protocols::topology_broker
• ClaimingMoverAP : protocols::environment
• ClaimingMoverCAP : protocols::environment
• ClaimingMoverCOP : protocols::environment
• ClaimingMoverOP : protocols::environment
• ClaimStrengthAP : protocols::environment::claims
• ClaimStrengthCAP : protocols::environment::claims
• ClaimStrengthCOP : protocols::environment::claims
• ClaimStrengthOP : protocols::environment::claims
• ClassicAbinitioCOP : protocols::abinitio
• ClassicAbinitioOP : protocols::abinitio
• ClassicFragmentMoverCOP : protocols::simple_moves
• ClassicFragmentMoverOP : protocols::simple_moves
• ClassicMatchAlgorithmCOP : protocols::match::downstream
• ClassicMatchAlgorithmOP : protocols::match::downstream
• CloseOneCDRLoopCOP : protocols::antibody
• CloseOneCDRLoopOP : protocols::antibody
• CloseOneMoverCOP : protocols::antibody_legacy
• CloseOneMoverOP : protocols::antibody_legacy
• ClosureProblemCOP : protocols::kinematic_closure
• ClosureProblemOP : protocols::kinematic_closure
• ClosureSolutionCOP : protocols::kinematic_closure
• ClosureSolutionOP : protocols::kinematic_closure
• CloudPDBWriterCOP : protocols::match::output
• CloudPDBWriterOP : protocols::match::output
• ClusterBaseCOP : protocols::cluster
• ClusterBaseOP : protocols::cluster
• ClusterPhilStyleCOP : protocols::cluster
• ClusterPhilStyleOP : protocols::cluster
• CoarseRNA_LoopCloserOP : protocols::coarse_rna
• CombineChainsMoverCOP : protocols::domain_assembly
• CombineChainsMoverOP : protocols::domain_assembly
• CombinedFilterCOP : protocols::filters
• CombinedFilterOP : protocols::filters
• CombinedTaskOperationOP : protocols::flxbb
• CompareQueryPositionCOP : protocols::frag_picker
• CompareQueryPositionOP : protocols::frag_picker
• CompareScoreComponentCOP : protocols::frag_picker
• CompareScoreComponentOP : protocols::frag_picker
• CompareTotalScoreCOP : protocols::frag_picker
• CompareTotalScoreOP : protocols::frag_picker
• CompositeSegment : protocols::rbsegment_relax
• CompositionMoverCOP : protocols::moves
• CompositionMoverOP : protocols::moves
• CompoundFilterCOP : protocols::filters
• CompoundFilterOP : protocols::filters
• ComputeLigandRDFCOP : protocols::ligand_docking
• ComputeLigandRDFOP : protocols::ligand_docking
• ConcurrencyTestCOP : protocols::features::helixAssembly
• ConcurrencyTestOP : protocols::features::helixAssembly
• ConformationViewerOP : protocols::viewer
• ConformerSwitchMoverCOP : protocols::docking
• ConformerSwitchMoverOP : protocols::docking
• ConnectRightAP : protocols::forge::build
• ConnectRightCAP : protocols::forge::build
• ConnectRightCOP : protocols::forge::build
• ConnectRightOP : protocols::forge::build
• ConsensusDesignMoverOP : protocols::simple_moves
• ConservativeDesignOperationCOP : protocols::antibody::design
• ConservativeDesignOperationOP : protocols::antibody::design
• ConservedPosMutationFilterCOP : protocols::simple_filters
• ConservedPosMutationFilterOP : protocols::simple_filters
• ConstAbinitioMoverWeightAP : protocols::topology_broker::weights
• ConstAbinitioMoverWeightCAP : protocols::topology_broker::weights
• ConstAbinitioMoverWeightCOP : protocols::topology_broker::weights
• ConstAbinitioMoverWeightOP : protocols::topology_broker::weights
• ConstraintClaimerAP : protocols::topology_broker
• ConstraintClaimerCAP : protocols::topology_broker
• ConstraintClaimerCOP : protocols::topology_broker
• ConstraintClaimerOP : protocols::topology_broker
• ConstraintedOptimizationWeightFuncOP : protocols::optimize_weights
• ConstraintEvaluatorCOP : protocols::constraints_additional
• ConstraintEvaluatorOP : protocols::constraints_additional
• ConstraintEvaluatorWrapperAP : protocols::topology_broker
• ConstraintEvaluatorWrapperCAP : protocols::topology_broker
• ConstraintEvaluatorWrapperCOP : protocols::topology_broker
• ConstraintEvaluatorWrapperOP : protocols::topology_broker
• ConstraintFileRCGCAP : protocols::forge::constraints
• ConstraintFileRCGOP : protocols::forge::constraints
• ConstraintFragmentSamplerOP : protocols::abinitio
• ConstrainToIdealMoverCOP : protocols::simple_moves
• ConstrainToIdealMoverOP : protocols::simple_moves
• ConstraintOPs : protocols::flxbb
• ConstraintPreparerCOP : protocols::abinitio::abscript
• ConstraintPreparerOP : protocols::abinitio::abscript
• ConstraintScoreCutoffFilterCOP : protocols::simple_filters
• ConstraintScoreCutoffFilterOP : protocols::simple_filters
• ConstraintSetMoverCOP : protocols::simple_moves
• ConstraintSetMoverOP : protocols::simple_moves
• ConstraintSetScoreCOP : protocols::sic_dock
• ConstraintSetScoreOP : protocols::sic_dock
• ContactCOP : protocols::frag_picker
• ContactCountsCOP : protocols::frag_picker
• ContactCountsOP : protocols::frag_picker
• ContactMapCOP : protocols::contact_map
• ContactMapOP : protocols::contact_map
• ContactOP : protocols::frag_picker
• ContactPartnerAP : protocols::contact_map
• ContingentAcceptMoverCOP : protocols::simple_moves
• ContingentAcceptMoverOP : protocols::simple_moves
• ContingentFilterCOP : protocols::filters
• ContingentFilterOP : protocols::filters
• ControlStrengths : protocols::environment::claims
• ConvergenceCheckCOP : protocols::moves::mc_convergence_checks
• ConvergenceCheckOP : protocols::moves::mc_convergence_checks
• CopyDofMoverCOP : protocols::simple_moves
• CopyDofMoverOP : protocols::simple_moves
• CopyDofRotamerCOP : protocols::rotamer_sampler::copy_dofs
• CopyDofRotamerOP : protocols::rotamer_sampler::copy_dofs
• CoreDunbrackFilterCOP : protocols::fldsgn::filters
• CoreDunbrackFilterOP : protocols::fldsgn::filters
• CountFromLeftAP : protocols::forge::build
• CountFromLeftCAP : protocols::forge::build
• CountFromLeftCOP : protocols::forge::build
• CountFromLeftOP : protocols::forge::build
• CovalentConnectionReplaceInfoCOP : protocols::toolbox::match_enzdes_util
• CovalentConnectionReplaceInfoOP : protocols::toolbox::match_enzdes_util
• CovalentResidueNetworkCOP : protocols::toolbox
• CovalentResidueNetworkOP : protocols::toolbox
• CreateMembranePoseMoverCOP : protocols::membrane
• CreateMembranePoseMoverOP : protocols::membrane
• CrossPeakAP : protocols::noesy_assign
• CrossPeakCAP : protocols::noesy_assign
• CrossPeakCOP : protocols::noesy_assign
• CrossPeakInfoAP : protocols::noesy_assign
• CrossPeakInfoCAP : protocols::noesy_assign
• CrossPeakInfoCOP : protocols::noesy_assign
• CrossPeakInfoOP : protocols::noesy_assign
• CrossPeakListAP : protocols::noesy_assign
• CrossPeakListCAP : protocols::noesy_assign
• CrossPeakListCOP : protocols::noesy_assign
• CrossPeakListOP : protocols::noesy_assign
• CrossPeakOP : protocols::noesy_assign
• CrystalContactsOperationCOP : protocols::toolbox::task_operations
• CrystalContactsOperationOP : protocols::toolbox::task_operations
• CSScoreCOP : protocols::frag_picker::scores
• CSScoreOP : protocols::frag_picker::scores
• CustomScoreSelectorCOP : protocols::frag_picker
• CustomScoreSelectorOP : protocols::frag_picker
• CutBiasClaimAP : protocols::environment::claims
• CutBiasClaimCAP : protocols::environment::claims
• CutBiasClaimCOP : protocols::environment::claims
• CutBiasClaimerAP : protocols::topology_broker
• CutBiasClaimerCAP : protocols::topology_broker
• CutBiasClaimerCOP : protocols::topology_broker
• CutBiasClaimerOP : protocols::topology_broker
• CutBiasClaimOP : protocols::environment::claims
• CutBiasElements : protocols::environment::claims
• CutChainMoverCOP : protocols::simple_moves
• CutChainMoverOP : protocols::simple_moves
• CutClaimAP : protocols::topology_broker::claims
• CutClaimCAP : protocols::topology_broker::claims
• CutClaimCOP : protocols::topology_broker::claims
• CutClaimOP : protocols::topology_broker::claims
• CutClaims : protocols::topology_broker::claims
• CutElements : protocols::environment::claims
• CycleMoverCOP : protocols::moves
• CycleMoverOP : protocols::moves
• CyclicMoverCOP : protocols::moves
• CyclicMoverOP : protocols::moves