- i -

• IdealGeometryOpenerCOP : protocols::loop_modeling::openers
• IdealGeometryOpenerOP : protocols::loop_modeling::openers
• IdealizeMoverCOP : protocols::idealize
• IdealizeMoverOP : protocols::idealize
• IdealizeNonPhiPsiCOP : protocols::kinematic_closure::perturbers
• IdealizeNonPhiPsiOP : protocols::kinematic_closure::perturbers
• IfThenFilterCOP : protocols::filters
• IfThenFilterOP : protocols::filters
• IgnoreSubsetConstraintSetCOP : protocols::comparative_modeling
• IgnoreSubsetConstraintSetOP : protocols::comparative_modeling
• ImplicitFastClashCheckAP : protocols::scoring
• ImplicitFastClashCheckCAP : protocols::scoring
• ImplicitFastClashCheckCOP : protocols::scoring
• ImplicitFastClashCheckOP : protocols::scoring
• ImportUnboundRotamersOperationCOP : protocols::toolbox::task_operations
• ImportUnboundRotamersOperationOP : protocols::toolbox::task_operations
• IndependentLoopMoverCOP : protocols::loops::loop_mover
• IndependentLoopMoverOP : protocols::loops::loop_mover
• IndexList : protocols::loop_modeling
• InitializationStrengths : protocols::environment::claims
• InnerJobCOP : protocols::jd2
• InnerJobOP : protocols::jd2
• InnerMap : protocols::noesy_assign
• InnerMultiThreadingJobCOP : protocols::jd2
• InnerMultiThreadingJobOP : protocols::jd2
• InputStreamRotamerCOP : protocols::rotamer_sampler::input_streams
• InputStreamRotamerOP : protocols::rotamer_sampler::input_streams
• InputStreamWithResidueInfoCOP : protocols::stepwise::sampling::protein
• InputStreamWithResidueInfoOP : protocols::stepwise::sampling::protein
• InputterSP : protocols::inputter
• InputterStreamSP : protocols::inputter
• InSetExpressionCOP : protocols::pack_daemon
• InSetExpressionOP : protocols::pack_daemon
• IntegrationTestBreakerCOP : protocols::stepwise::screener
• IntegrationTestBreakerOP : protocols::stepwise::screener
• InterbondAngleScoreCOP : protocols::frag_picker::scores
• InterbondAngleScoreOP : protocols::frag_picker::scores
• InterfaceAnalyzerMoverCOP : protocols::analysis
• InterfaceAnalyzerMoverOP : protocols::analysis
• InterfaceBindingEnergyDensityFilterCOP : protocols::simple_filters
• InterfaceBindingEnergyDensityFilterOP : protocols::simple_filters
• InterfaceBuilderCOP : protocols::ligand_docking
• InterfaceBuilderCOPs : protocols::ligand_docking
• InterfaceBuilderOP : protocols::ligand_docking
• InterfaceBuilderOPs : protocols::ligand_docking
• InterfaceCOP : protocols::scoring
• InterfaceFeaturesCOP : protocols::features
• InterfaceFeaturesOP : protocols::features
• InterfaceInfoOP : protocols::scoring
• InterfaceOP : protocols::scoring
• InterfaceSasaFilterCOP : protocols::simple_filters
• InterfaceSasaFilterOP : protocols::simple_filters
• InterfaceScoreCalculatorCOP : protocols::ligand_docking
• InterfaceScoreCalculatorCOPs : protocols::ligand_docking
• InterfaceScoreCalculatorOP : protocols::ligand_docking
• InterfaceScoreCalculatorOPs : protocols::ligand_docking
• InterfaceSidechainMinMoverCOP : protocols::docking
• InterfaceSidechainMinMoverOP : protocols::docking
• InterfaceTaskOperationCOP : protocols::toolbox::task_operations
• InterfaceTaskOperationOP : protocols::toolbox::task_operations
• InterGroupNeighborsCalculatorCOP : protocols::toolbox::pose_metric_calculators
• InterGroupNeighborsCalculatorOP : protocols::toolbox::pose_metric_calculators
• InterlockAromaOP : protocols::flxbb
• InterlockingAromaFilterCOP : protocols::fldsgn::filters
• InterlockingAromaFilterOP : protocols::fldsgn::filters
• InverseRotamersRCGCAP : protocols::forge::constraints
• InverseRotamersRCGOP : protocols::forge::constraints
• InvrotCollectorCOP : protocols::toolbox::match_enzdes_util
• InvrotCollectorOP : protocols::toolbox::match_enzdes_util
• InvrotTargetCOP : protocols::toolbox::match_enzdes_util
• InvrotTargetOP : protocols::toolbox::match_enzdes_util
• InvrotTreeCOP : protocols::toolbox::match_enzdes_util
• InvrotTreeNodeBaseAP : protocols::toolbox::match_enzdes_util
• InvrotTreeNodeBaseCAP : protocols::toolbox::match_enzdes_util
• InvrotTreeNodeBaseCOP : protocols::toolbox::match_enzdes_util
• InvrotTreeNodeBaseOP : protocols::toolbox::match_enzdes_util
• InvrotTreeNodeCOP : protocols::toolbox::match_enzdes_util
• InvrotTreeNodeOP : protocols::toolbox::match_enzdes_util
• InvrotTreeOP : protocols::toolbox::match_enzdes_util
• InvrotTreeRCGCAP : protocols::forge::constraints
• InvrotTreeRCGOP : protocols::forge::constraints
• IRCollectionCOP : protocols::motifs
• IRCollectionOP : protocols::motifs
• IRCollectionOPs : protocols::motifs
• IteratedConvergenceMoverCOP : protocols::moves
• IteratedConvergenceMoverOP : protocols::moves
• IterativeVectorExpressionCOP : protocols::pack_daemon
• IterativeVectorExpressionOP : protocols::pack_daemon