basic::options::OptionKeys::abinitio::star Namespace Reference

Functions
BooleanOptionKey const	star ("abinitio:star")
RealOptionKey const	initial_dist_cutoff ("abinitio:star:initial_dist_cutoff")
IntegerOptionKey const	min_unaligned_len ("abinitio:star:min_unaligned_len")
IntegerOptionKey const	short_loop_len ("abinitio:star:short_loop_len")

Variables
BooleanOptionKey const	star
RealOptionKey const	initial_dist_cutoff
IntegerOptionKey const	min_unaligned_len
IntegerOptionKey const	short_loop_len

Function Documentation

RealOptionKey const basic::options::OptionKeys::abinitio::star::initial_dist_cutoff

(

"abinitio:star:initial_dist_cutoff"

)

IntegerOptionKey const basic::options::OptionKeys::abinitio::star::min_unaligned_len

(

"abinitio:star:min_unaligned_len"

)

IntegerOptionKey const basic::options::OptionKeys::abinitio::star::short_loop_len

(

"abinitio:star:short_loop_len"

)

BooleanOptionKey const basic::options::OptionKeys::abinitio::star::star

(

"abinitio:star"

)

Variable Documentation

RealOptionKey const basic::options::OptionKeys::abinitio::star::initial_dist_cutoff("abinitio:star:initial_dist_cutoff")

Referenced by add_rosetta_options_0().

IntegerOptionKey const basic::options::OptionKeys::abinitio::star::min_unaligned_len("abinitio:star:min_unaligned_len")

Referenced by add_rosetta_options_0().

IntegerOptionKey const basic::options::OptionKeys::abinitio::star::short_loop_len("abinitio:star:short_loop_len")

Referenced by add_rosetta_options_0().

BooleanOptionKey const basic::options::OptionKeys::abinitio::star::star("abinitio:star")

Referenced by add_rosetta_options_0(), and numeric::model_quality::COMAS().