basic::options::OptionKeys::packing Namespace Reference

Namespaces
	ex1
	ex1aro
	ex1aro_exposed
	ex2
	ex2aro
	ex2aro_exposed
	ex3
	ex4
	exdna

Variables
BooleanOptionKey const	packing ("packing")
BooleanOptionKey const	repack_only ("packing:repack_only")
BooleanOptionKey const	prevent_repacking ("packing:prevent_repacking")
RealOptionKey const	cenrot_cutoff ("packing:cenrot_cutoff")
BooleanOptionKey const	ignore_ligand_chi ("packing:ignore_ligand_chi")
IntegerOptionKey const	ndruns ("packing:ndruns")
BooleanOptionKey const	soft_rep_design ("packing:soft_rep_design")
BooleanOptionKey const	use_electrostatic_repulsion ("packing:use_electrostatic_repulsion")
BooleanOptionKey const	dump_rotamer_sets ("packing:dump_rotamer_sets")
RealOptionKey const	dunbrack_prob_buried ("packing:dunbrack_prob_buried")
RealOptionKey const	dunbrack_prob_nonburied ("packing:dunbrack_prob_nonburied")
RealOptionKey const	dunbrack_prob_nonburied_semirotameric ("packing:dunbrack_prob_nonburied_semirotameric")
BooleanOptionKey const	no_optH ("packing:no_optH")
BooleanOptionKey const	optH_MCA ("packing:optH_MCA")
BooleanOptionKey const	pack_missing_sidechains ("packing:pack_missing_sidechains")
BooleanOptionKey const	preserve_c_beta ("packing:preserve_c_beta")
BooleanOptionKey const	flip_HNQ ("packing:flip_HNQ")
IntegerVectorOptionKey const	fix_his_tautomer ("packing:fix_his_tautomer")
BooleanOptionKey const	print_pymol_selection ("packing:print_pymol_selection")
IntegerOptionKey const	extrachi_cutoff ("packing:extrachi_cutoff")
FileVectorOptionKey const	resfile ("packing:resfile")
RealOptionKey const	outeriterations_scaling ("packing:outeriterations_scaling")
RealOptionKey const	inneriterations_scaling ("packing:inneriterations_scaling")
BooleanOptionKey const	explicit_h2o ("packing:explicit_h2o")
StringVectorOptionKey const	adducts ("packing:adducts")
BooleanOptionKey const	solvate ("packing:solvate")
BooleanOptionKey const	use_input_sc ("packing:use_input_sc")
FileVectorOptionKey const	unboundrot ("packing:unboundrot")
RealOptionKey const	max_rotbump_energy ("packing:max_rotbump_energy")
BooleanOptionKey const	lazy_ig ("packing:lazy_ig")
BooleanOptionKey const	double_lazy_ig ("packing:double_lazy_ig")
IntegerOptionKey const	double_lazy_ig_mem_limit ("packing:double_lazy_ig_mem_limit")
IntegerOptionKey const	linmem_ig ("packing:linmem_ig")
IntegerOptionKey const	multi_cool_annealer ("packing:multi_cool_annealer")
RealVectorOptionKey const	minpack_temp_schedule ("packing:minpack_temp_schedule")
IntegerOptionKey const	minpack_inner_iteration_scale ("packing:minpack_inner_iteration_scale")
BooleanOptionKey const	minpack_disable_bumpcheck ("packing:minpack_disable_bumpcheck")

Variable Documentation

StringVectorOptionKey const basic::options::OptionKeys::packing::adducts

Referenced by add_rosetta_options_1().

RealOptionKey const basic::options::OptionKeys::packing::cenrot_cutoff

Referenced by add_rosetta_options_1().

BooleanOptionKey const basic::options::OptionKeys::packing::double_lazy_ig

Referenced by add_rosetta_options_1().

IntegerOptionKey const basic::options::OptionKeys::packing::double_lazy_ig_mem_limit

Referenced by add_rosetta_options_1().

BooleanOptionKey const basic::options::OptionKeys::packing::dump_rotamer_sets

Referenced by add_rosetta_options_1().

RealOptionKey const basic::options::OptionKeys::packing::dunbrack_prob_buried

Referenced by add_rosetta_options_1().

RealOptionKey const basic::options::OptionKeys::packing::dunbrack_prob_nonburied

Referenced by add_rosetta_options_1().

RealOptionKey const basic::options::OptionKeys::packing::dunbrack_prob_nonburied_semirotameric

Referenced by add_rosetta_options_1().

BooleanOptionKey const basic::options::OptionKeys::packing::explicit_h2o

Referenced by add_rosetta_options_1(), and basic::options::process().

IntegerOptionKey const basic::options::OptionKeys::packing::extrachi_cutoff

Referenced by add_rosetta_options_1().

IntegerVectorOptionKey const basic::options::OptionKeys::packing::fix_his_tautomer

Referenced by add_rosetta_options_1().

BooleanOptionKey const basic::options::OptionKeys::packing::flip_HNQ

Referenced by add_rosetta_options_1().

BooleanOptionKey const basic::options::OptionKeys::packing::ignore_ligand_chi

Referenced by add_rosetta_options_1().

RealOptionKey const basic::options::OptionKeys::packing::inneriterations_scaling

Referenced by add_rosetta_options_1().

BooleanOptionKey const basic::options::OptionKeys::packing::lazy_ig

Referenced by add_rosetta_options_1().

IntegerOptionKey const basic::options::OptionKeys::packing::linmem_ig

Referenced by add_rosetta_options_1().

RealOptionKey const basic::options::OptionKeys::packing::max_rotbump_energy

Referenced by add_rosetta_options_1().

BooleanOptionKey const basic::options::OptionKeys::packing::minpack_disable_bumpcheck

Referenced by add_rosetta_options_1().

IntegerOptionKey const basic::options::OptionKeys::packing::minpack_inner_iteration_scale

Referenced by add_rosetta_options_1().

RealVectorOptionKey const basic::options::OptionKeys::packing::minpack_temp_schedule

Referenced by add_rosetta_options_1().

IntegerOptionKey const basic::options::OptionKeys::packing::multi_cool_annealer

Referenced by add_rosetta_options_1().

IntegerOptionKey const basic::options::OptionKeys::packing::ndruns

Referenced by add_rosetta_options_1().

BooleanOptionKey const basic::options::OptionKeys::packing::no_optH

Referenced by add_rosetta_options_1().

BooleanOptionKey const basic::options::OptionKeys::packing::optH_MCA

Referenced by add_rosetta_options_1().

RealOptionKey const basic::options::OptionKeys::packing::outeriterations_scaling

Referenced by add_rosetta_options_1().

BooleanOptionKey const basic::options::OptionKeys::packing::pack_missing_sidechains

Referenced by add_rosetta_options_1().

BooleanOptionKey const basic::options::OptionKeys::packing::packing

Referenced by add_rosetta_options_1(), and basic::options::process().

BooleanOptionKey const basic::options::OptionKeys::packing::preserve_c_beta

Referenced by add_rosetta_options_1().

BooleanOptionKey const basic::options::OptionKeys::packing::prevent_repacking

Referenced by add_rosetta_options_1().

BooleanOptionKey const basic::options::OptionKeys::packing::print_pymol_selection

Referenced by add_rosetta_options_1().

BooleanOptionKey const basic::options::OptionKeys::packing::repack_only

Referenced by add_rosetta_options_1(), and add_rosetta_options_2().

FileVectorOptionKey const basic::options::OptionKeys::packing::resfile

Referenced by add_rosetta_options_1().

BooleanOptionKey const basic::options::OptionKeys::packing::soft_rep_design

Referenced by add_rosetta_options_1().

BooleanOptionKey const basic::options::OptionKeys::packing::solvate

Referenced by add_rosetta_options_1(), and basic::options::process().

FileVectorOptionKey const basic::options::OptionKeys::packing::unboundrot

Referenced by add_rosetta_options_1().

BooleanOptionKey const basic::options::OptionKeys::packing::use_electrostatic_repulsion

Referenced by add_rosetta_options_1().

BooleanOptionKey const basic::options::OptionKeys::packing::use_input_sc

Referenced by add_rosetta_options_1().