basic::options::OptionKeys::docking::ligand Namespace Reference

Namespaces
	grid

Functions
BooleanOptionKey const	ligand ("docking:ligand")
StringOptionKey const	protocol ("docking:ligand:protocol")
BooleanOptionKey const	soft_rep ("docking:ligand:soft_rep")
BooleanOptionKey const	tweak_sxfn ("docking:ligand:tweak_sxfn")
BooleanOptionKey const	old_estat ("docking:ligand:old_estat")
BooleanOptionKey const	random_conformer ("docking:ligand:random_conformer")
IntegerOptionKey const	improve_orientation ("docking:ligand:improve_orientation")
BooleanOptionKey const	mutate_same_name3 ("docking:ligand:mutate_same_name3")
RealOptionKey const	subset_to_keep ("docking:ligand:subset_to_keep")
RealOptionKey const	min_rms ("docking:ligand:min_rms")
IntegerOptionKey const	max_poses ("docking:ligand:max_poses")
BooleanOptionKey const	minimize_ligand ("docking:ligand:minimize_ligand")
RealOptionKey const	harmonic_torsions ("docking:ligand:harmonic_torsions")
BooleanOptionKey const	use_ambig_constraints ("docking:ligand:use_ambig_constraints")
IntegerOptionKey const	shear_moves ("docking:ligand:shear_moves")
BooleanOptionKey const	minimize_backbone ("docking:ligand:minimize_backbone")
RealOptionKey const	harmonic_Calphas ("docking:ligand:harmonic_Calphas")
RealOptionKey const	tether_ligand ("docking:ligand:tether_ligand")
RealVectorOptionKey const	start_from ("docking:ligand:start_from")
StringOptionKey const	option_file ("docking:ligand:option_file")
BooleanOptionKey const	rescore ("docking:ligand:rescore")

Variables
BooleanOptionKey const	ligand
StringOptionKey const	protocol
BooleanOptionKey const	soft_rep
BooleanOptionKey const	tweak_sxfn
BooleanOptionKey const	old_estat
BooleanOptionKey const	random_conformer
IntegerOptionKey const	improve_orientation
BooleanOptionKey const	mutate_same_name3
RealOptionKey const	subset_to_keep
RealOptionKey const	min_rms
IntegerOptionKey const	max_poses
BooleanOptionKey const	minimize_ligand
RealOptionKey const	harmonic_torsions
BooleanOptionKey const	use_ambig_constraints
IntegerOptionKey const	shear_moves
BooleanOptionKey const	minimize_backbone
RealOptionKey const	harmonic_Calphas
RealOptionKey const	tether_ligand
RealVectorOptionKey const	start_from
StringOptionKey const	option_file
BooleanOptionKey const	rescore

Function Documentation

RealOptionKey const basic::options::OptionKeys::docking::ligand::harmonic_Calphas

(

"docking:ligand:harmonic_Calphas"

)

RealOptionKey const basic::options::OptionKeys::docking::ligand::harmonic_torsions

(

"docking:ligand:harmonic_torsions"

)

IntegerOptionKey const basic::options::OptionKeys::docking::ligand::improve_orientation

(

"docking:ligand:improve_orientation"

)

BooleanOptionKey const basic::options::OptionKeys::docking::ligand::ligand

(

"docking:ligand"

)

IntegerOptionKey const basic::options::OptionKeys::docking::ligand::max_poses

(

"docking:ligand:max_poses"

)

RealOptionKey const basic::options::OptionKeys::docking::ligand::min_rms

(

"docking:ligand:min_rms"

)

BooleanOptionKey const basic::options::OptionKeys::docking::ligand::minimize_backbone

(

"docking:ligand:minimize_backbone"

)

BooleanOptionKey const basic::options::OptionKeys::docking::ligand::minimize_ligand

(

"docking:ligand:minimize_ligand"

)

BooleanOptionKey const basic::options::OptionKeys::docking::ligand::mutate_same_name3

(

"docking:ligand:mutate_same_name3"

)

BooleanOptionKey const basic::options::OptionKeys::docking::ligand::old_estat

(

"docking:ligand:old_estat"

)

StringOptionKey const basic::options::OptionKeys::docking::ligand::option_file

(

"docking:ligand:option_file"

)

StringOptionKey const basic::options::OptionKeys::docking::ligand::protocol

(

"docking:ligand:protocol"

)

BooleanOptionKey const basic::options::OptionKeys::docking::ligand::random_conformer

(

"docking:ligand:random_conformer"

)

BooleanOptionKey const basic::options::OptionKeys::docking::ligand::rescore

(

"docking:ligand:rescore"

)

IntegerOptionKey const basic::options::OptionKeys::docking::ligand::shear_moves

(

"docking:ligand:shear_moves"

)

BooleanOptionKey const basic::options::OptionKeys::docking::ligand::soft_rep

(

"docking:ligand:soft_rep"

)

RealVectorOptionKey const basic::options::OptionKeys::docking::ligand::start_from

(

"docking:ligand:start_from"

)

RealOptionKey const basic::options::OptionKeys::docking::ligand::subset_to_keep

(

"docking:ligand:subset_to_keep"

)

RealOptionKey const basic::options::OptionKeys::docking::ligand::tether_ligand

(

"docking:ligand:tether_ligand"

)

BooleanOptionKey const basic::options::OptionKeys::docking::ligand::tweak_sxfn

(

"docking:ligand:tweak_sxfn"

)

BooleanOptionKey const basic::options::OptionKeys::docking::ligand::use_ambig_constraints

(

"docking:ligand:use_ambig_constraints"

)

Variable Documentation

RealOptionKey const basic::options::OptionKeys::docking::ligand::harmonic_Calphas("docking:ligand:harmonic_Calphas")

Referenced by add_rosetta_options_0().

RealOptionKey const basic::options::OptionKeys::docking::ligand::harmonic_torsions("docking:ligand:harmonic_torsions")

Referenced by add_rosetta_options_0().

IntegerOptionKey const basic::options::OptionKeys::docking::ligand::improve_orientation("docking:ligand:improve_orientation")

Referenced by add_rosetta_options_0().

BooleanOptionKey const basic::options::OptionKeys::docking::ligand::ligand("docking:ligand")

Referenced by add_rosetta_options_0().

IntegerOptionKey const basic::options::OptionKeys::docking::ligand::max_poses("docking:ligand:max_poses")

Referenced by add_rosetta_options_0().

RealOptionKey const basic::options::OptionKeys::docking::ligand::min_rms("docking:ligand:min_rms")

Referenced by add_rosetta_options_0().

BooleanOptionKey const basic::options::OptionKeys::docking::ligand::minimize_backbone("docking:ligand:minimize_backbone")

Referenced by add_rosetta_options_0().

BooleanOptionKey const basic::options::OptionKeys::docking::ligand::minimize_ligand("docking:ligand:minimize_ligand")

Referenced by add_rosetta_options_0().

BooleanOptionKey const basic::options::OptionKeys::docking::ligand::mutate_same_name3("docking:ligand:mutate_same_name3")

Referenced by add_rosetta_options_0().

BooleanOptionKey const basic::options::OptionKeys::docking::ligand::old_estat("docking:ligand:old_estat")

Referenced by add_rosetta_options_0().

StringOptionKey const basic::options::OptionKeys::docking::ligand::option_file("docking:ligand:option_file")

Referenced by add_rosetta_options_0().

StringOptionKey const basic::options::OptionKeys::docking::ligand::protocol("docking:ligand:protocol")

Referenced by add_rosetta_options_0(), and add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::docking::ligand::random_conformer("docking:ligand:random_conformer")

Referenced by add_rosetta_options_0().

BooleanOptionKey const basic::options::OptionKeys::docking::ligand::rescore("docking:ligand:rescore")

Referenced by add_rosetta_options_0().

IntegerOptionKey const basic::options::OptionKeys::docking::ligand::shear_moves("docking:ligand:shear_moves")

Referenced by add_rosetta_options_0().

BooleanOptionKey const basic::options::OptionKeys::docking::ligand::soft_rep("docking:ligand:soft_rep")

Referenced by add_rosetta_options_0().

RealVectorOptionKey const basic::options::OptionKeys::docking::ligand::start_from("docking:ligand:start_from")

Referenced by add_rosetta_options_0().

RealOptionKey const basic::options::OptionKeys::docking::ligand::subset_to_keep("docking:ligand:subset_to_keep")

Referenced by add_rosetta_options_0().

RealOptionKey const basic::options::OptionKeys::docking::ligand::tether_ligand("docking:ligand:tether_ligand")

Referenced by add_rosetta_options_0().

BooleanOptionKey const basic::options::OptionKeys::docking::ligand::tweak_sxfn("docking:ligand:tweak_sxfn")

Referenced by add_rosetta_options_0().

BooleanOptionKey const basic::options::OptionKeys::docking::ligand::use_ambig_constraints("docking:ligand:use_ambig_constraints")

Referenced by add_rosetta_options_0().