APDBCMover Class Reference

APDBC mover. More...

Inheritance diagram for APDBCMover:

Public Member Functions
	APDBCMover ()
	~APDBCMover () override=default
void	read_in_insert_loop_info ()
void	apply (core::pose::Pose &pose) override
std::string	get_name () const override

Private Attributes
core::Size	insert_loop_start
core::Size	insert_point
core::Size	insert_loop_end
core::pose::Pose	scaffold
core::pose::Pose	anchor
core::pose::Pose	target

Detailed Description

APDBC mover.

Constructor & Destructor Documentation

APDBCMover::APDBCMover ( )

inline

References anchor, basic::options::OptionKeys::AnchoredPDBCreator::anchor_pdb, basic::options::option, pyrosetta.distributed.io::pose_from_file, read_in_insert_loop_info(), scaffold, scaffold_pdb, target, basic::options::OptionKeys::AnchoredPDBCreator::target_pdb, and value.

APDBCMover::~APDBCMover ( )

overridedefault

Member Function Documentation

void APDBCMover::apply ( core::pose::Pose &  pose )

inlineoverride

References anchor, basic::options::OptionKeys::AnchoredPDBCreator::APDBC_cycles, basic::options::OptionKeys::magnesium::montecarlo::cycles, test.T150_PyMOL_Integration::i, insert_loop_end, insert_loop_start, insert_point, basic::options::OptionKeys::jd2::jd2, basic::options::OptionKeys::cluster::loops, basic::options::option, scaffold, target, and value.

Referenced by pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask::execute().

std::string APDBCMover::get_name ( ) const

inlineoverride

void APDBCMover::read_in_insert_loop_info ( )

inline

References basic::options::OptionKeys::run::chain, basic::Error(), utility::io::izstream::fail(), test.G202_Module_PythonPDB::filename, insert_loop_end, insert_loop_start, insert_point, basic::options::option, scaffold, basic::options::OptionKeys::AnchoredPDBCreator::scaffold_loop, utility_exit, utility_exit_with_message, and value.

Referenced by APDBCMover().

Member Data Documentation

core::pose::Pose APDBCMover::anchor

private

Referenced by APDBCMover(), and apply().

core::Size APDBCMover::insert_loop_end

private

Referenced by apply(), and read_in_insert_loop_info().

core::Size APDBCMover::insert_loop_start

private

Referenced by apply(), and read_in_insert_loop_info().

core::Size APDBCMover::insert_point

private

Referenced by apply(), and read_in_insert_loop_info().

core::pose::Pose APDBCMover::scaffold

private

Referenced by APDBCMover(), apply(), and read_in_insert_loop_info().

core::pose::Pose APDBCMover::target

private

Referenced by APDBCMover(), and apply().

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The documentation for this class was generated from the following file:

• src/apps/public/interface_design/anchored_design/AnchoredPDBCreator.cc