multistage_rosetta_scripts.cc File Reference

#include <devel/init.hh>
#include <basic/Tracer.hh>
#include <basic/options/option.hh>
#include <basic/options/option_macros.hh>
#include <basic/options/keys/parser.OptionKeys.gen.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <utility/tag/Tag.hh>
#include <utility/exit.hh>
#include <utility/excn/Exceptions.hh>
#include <protocols/multistage_rosetta_scripts/MRSJobQueen.hh>
#include <protocols/multistage_rosetta_scripts/MRSJobQueenChecker.hh>
#include <protocols/rosetta_scripts/util.hh>
#include <protocols/jd3/JobDistributor.hh>
#include <protocols/jd3/JobDistributorFactory.hh>
#include <protocols/jd3/standard/PreliminaryLarvalJob.hh>
#include <protocols/jobdist/standard_mains.hh>
#include <protocols/jobdist/Jobs.hh>
#include <fstream>
#include <apps/public/rosetta_scripts/multistage/reverse_conversion_util.hh>

Functions
void	insert_stage_tag (std::string &s)
void	reverse_convert ()
void	convert ()
int	main (int argc, char *argv[])

Variables
static basic::Tracer	TR ("apps.public.rosetta_scripts.multistage.MultistageRosettaScripts")

Function Documentation

void convert

(

)

References utility::io::oc::cout, utility::tag::Tag::create(), utility::file_contents(), test.T200_Scoring::ii, insert_stage_tag(), basic::options::OptionKeys::in::file::job_definition_file, basic::options::option, options, erraser_single_res_analysis::out, basic::options::OptionKeys::parser::protocol, basic::options::OptionKeys::mh::match::ss, and basic::options::OptionKeys::inout::dbms::user.

Referenced by main(), fmt::BasicWriter< Char >::operator<<(), fmt::StrFormatSpec< Char >::StrFormatSpec(), and fmt::BasicWriter< Char >::write_str().

void insert_stage_tag

(

std::string &

s

)

References numeric::add(), basic::options::OptionKeys::out::nstruct, basic::options::option, options, basic::options::OptionKeys::mh::match::ss1, basic::options::OptionKeys::mh::match::ss2, basic::options::OptionKeys::inout::dbms::user, and utility_exit_with_message.

Referenced by convert().

int main	(	int	argc,
		char *	argv[]
	)

References convert(), basic::Tracer::Debug, utility::excn::Exception::display(), test.T009_Exceptions::e, test.G202_Module_PythonPDB::filename, basic::options::OptionKeys::parser::info, devel::init(), NEW_OPT, basic::options::option, options, reverse_convert(), runtime_assert, basic::options::TR, and basic::options::OptionKeys::inout::dbms::user.

void reverse_convert

(

)

References utility::io::oc::cout, utility::tag::Tag::create(), utility::file_contents(), basic::options::OptionKeys::in::file::job_definition_file, basic::options::option, options, erraser_single_res_analysis::out, basic::options::OptionKeys::parser::protocol, runtime_assert, and basic::options::OptionKeys::inout::dbms::user.

Referenced by main().

Variable Documentation

basic::Tracer TR("apps.public.rosetta_scripts.multistage.MultistageRosettaScripts")

static