basic::options::OptionKeys::mh Namespace Reference

Namespaces
	dump
	filter
	harvest
	match
	path
	score

Variables
BooleanOptionKey const	mh
StringOptionKey const	motif_out_file
FileVectorOptionKey const	harvest_motifs
FileVectorOptionKey const	print_motifs
FileVectorOptionKey const	remove_duplicates
FileVectorOptionKey const	dump_motif_pdbs
FileVectorOptionKey const	merge_motifs
FileVectorOptionKey const	merge_scores
BooleanOptionKey const	merge_motifs_one_per_bin
BooleanOptionKey const	gen_reverse_motifs_on_load
FileVectorOptionKey const	dump_input_pdb
FileVectorOptionKey const	score_pdbs
FileVectorOptionKey const	sequence_recovery
FileVectorOptionKey const	explicit_motif_score
FileVectorOptionKey const	harvest_scores
FileOptionKey const	print_scores
FileVectorOptionKey const	dump_matching_motifs
BooleanOptionKey const	score_across_chains_only
BooleanOptionKey const	normalize_score_ncontact
IntegerOptionKey const	harvest_motifs_min_hh_ends
BooleanOptionKey const	ignore_io_errors
RealOptionKey const	motif_match_radius
RealVectorOptionKey const	merge_similar_motifs

Variable Documentation

FileVectorOptionKey const basic::options::OptionKeys::mh::dump_input_pdb

Referenced by add_rosetta_options_10(), and main().

FileVectorOptionKey const basic::options::OptionKeys::mh::dump_matching_motifs

Referenced by add_rosetta_options_10().

FileVectorOptionKey const basic::options::OptionKeys::mh::dump_motif_pdbs

Referenced by add_rosetta_options_10().

FileVectorOptionKey const basic::options::OptionKeys::mh::explicit_motif_score

Referenced by add_rosetta_options_10().

BooleanOptionKey const basic::options::OptionKeys::mh::gen_reverse_motifs_on_load

Referenced by add_rosetta_options_10().

FileVectorOptionKey const basic::options::OptionKeys::mh::harvest_motifs

Referenced by add_rosetta_options_10(), harvest_motifs(), and main().

IntegerOptionKey const basic::options::OptionKeys::mh::harvest_motifs_min_hh_ends

Referenced by add_rosetta_options_10().

FileVectorOptionKey const basic::options::OptionKeys::mh::harvest_scores

Referenced by add_rosetta_options_10(), harvest_scores(), and main().

BooleanOptionKey const basic::options::OptionKeys::mh::ignore_io_errors

Referenced by add_rosetta_options_10().

FileVectorOptionKey const basic::options::OptionKeys::mh::merge_motifs

Referenced by add_rosetta_options_10(), main(), and merge_motifs().

BooleanOptionKey const basic::options::OptionKeys::mh::merge_motifs_one_per_bin

Referenced by add_rosetta_options_10().

FileVectorOptionKey const basic::options::OptionKeys::mh::merge_scores

Referenced by add_rosetta_options_10().

RealVectorOptionKey const basic::options::OptionKeys::mh::merge_similar_motifs

Referenced by add_rosetta_options_10().

BooleanOptionKey const basic::options::OptionKeys::mh::mh

Referenced by add_rosetta_options_10().

RealOptionKey const basic::options::OptionKeys::mh::motif_match_radius

Referenced by add_rosetta_options_10().

StringOptionKey const basic::options::OptionKeys::mh::motif_out_file

Referenced by add_rosetta_options_10(), harvest_motifs(), harvest_scores(), and merge_motifs().

BooleanOptionKey const basic::options::OptionKeys::mh::normalize_score_ncontact

Referenced by add_rosetta_options_10().

FileVectorOptionKey const basic::options::OptionKeys::mh::print_motifs

Referenced by add_rosetta_options_10(), main(), and print_motifs().

FileOptionKey const basic::options::OptionKeys::mh::print_scores

Referenced by add_rosetta_options_10(), main(), and print_scores().

FileVectorOptionKey const basic::options::OptionKeys::mh::remove_duplicates

Referenced by add_rosetta_options_10().

BooleanOptionKey const basic::options::OptionKeys::mh::score_across_chains_only

Referenced by add_rosetta_options_10().

FileVectorOptionKey const basic::options::OptionKeys::mh::score_pdbs

Referenced by add_rosetta_options_10().

FileVectorOptionKey const basic::options::OptionKeys::mh::sequence_recovery

Referenced by add_rosetta_options_10().