basic::options::OptionKeys::jumps Namespace Reference

Variables
BooleanOptionKey const	jumps
BooleanOptionKey const	evaluate
FileOptionKey const	extra_frags_for_ss
BooleanOptionKey const	fix_chainbreak
FileOptionKey const	fix_jumps
FileOptionKey const	jump_lib
FileOptionKey const	loop_definition_from_file
BooleanOptionKey const	no_chainbreak_in_relax
FileOptionKey const	pairing_file
IntegerVectorOptionKey const	random_sheets
FileOptionKey const	residue_pair_jump_file
IntegerVectorOptionKey const	sheets
FileOptionKey const	topology_file
BooleanOptionKey const	bb_moves
BooleanOptionKey const	no_wobble
BooleanOptionKey const	no_shear
BooleanOptionKey const	no_sample_ss_jumps
IntegerOptionKey const	invrate_jump_move
RealOptionKey const	chainbreak_weight_stage1
RealOptionKey const	chainbreak_weight_stage2
RealOptionKey const	chainbreak_weight_stage3
RealOptionKey const	chainbreak_weight_stage4
BooleanOptionKey const	ramp_chainbreaks
RealOptionKey const	increase_chainbreak
BooleanOptionKey const	overlap_chainbreak
RealOptionKey const	sep_switch_accelerate
BooleanOptionKey const	dump_frags
IntegerOptionKey const	njumps
IntegerOptionKey const	max_strand_gap_allowed
RealOptionKey const	contact_score
BooleanOptionKey const	filter_templates

Variable Documentation

BooleanOptionKey const basic::options::OptionKeys::jumps::bb_moves

Referenced by add_rosetta_options_3().

RealOptionKey const basic::options::OptionKeys::jumps::chainbreak_weight_stage1

Referenced by add_rosetta_options_3().

RealOptionKey const basic::options::OptionKeys::jumps::chainbreak_weight_stage2

Referenced by add_rosetta_options_3().

RealOptionKey const basic::options::OptionKeys::jumps::chainbreak_weight_stage3

Referenced by add_rosetta_options_3().

RealOptionKey const basic::options::OptionKeys::jumps::chainbreak_weight_stage4

Referenced by add_rosetta_options_3().

RealOptionKey const basic::options::OptionKeys::jumps::contact_score

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::jumps::dump_frags

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::jumps::evaluate

Referenced by add_rosetta_options_3(), and numeric::nls::lmmin().

FileOptionKey const basic::options::OptionKeys::jumps::extra_frags_for_ss

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::jumps::filter_templates

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::jumps::fix_chainbreak

Referenced by add_rosetta_options_3().

FileOptionKey const basic::options::OptionKeys::jumps::fix_jumps

Referenced by add_rosetta_options_3().

RealOptionKey const basic::options::OptionKeys::jumps::increase_chainbreak

Referenced by add_rosetta_options_3().

IntegerOptionKey const basic::options::OptionKeys::jumps::invrate_jump_move

Referenced by add_rosetta_options_3().

FileOptionKey const basic::options::OptionKeys::jumps::jump_lib

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::jumps::jumps

Referenced by add_rosetta_options_3().

FileOptionKey const basic::options::OptionKeys::jumps::loop_definition_from_file

Referenced by add_rosetta_options_3().

IntegerOptionKey const basic::options::OptionKeys::jumps::max_strand_gap_allowed

Referenced by add_rosetta_options_3().

IntegerOptionKey const basic::options::OptionKeys::jumps::njumps

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::jumps::no_chainbreak_in_relax

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::jumps::no_sample_ss_jumps

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::jumps::no_shear

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::jumps::no_wobble

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::jumps::overlap_chainbreak

Referenced by add_rosetta_options_3(), and MyScoreMover::apply().

FileOptionKey const basic::options::OptionKeys::jumps::pairing_file

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::jumps::ramp_chainbreaks

Referenced by add_rosetta_options_3().

IntegerVectorOptionKey const basic::options::OptionKeys::jumps::random_sheets

Referenced by add_rosetta_options_3().

FileOptionKey const basic::options::OptionKeys::jumps::residue_pair_jump_file

Referenced by add_rosetta_options_3().

RealOptionKey const basic::options::OptionKeys::jumps::sep_switch_accelerate

Referenced by add_rosetta_options_3().

IntegerVectorOptionKey const basic::options::OptionKeys::jumps::sheets

Referenced by add_rosetta_options_3().

FileOptionKey const basic::options::OptionKeys::jumps::topology_file

Referenced by add_rosetta_options_3().