basic::options::OptionKeys::coupled_moves Namespace Reference

Variables
BooleanOptionKey const	coupled_moves
IntegerOptionKey const	ntrials
IntegerOptionKey const	number_ligands
RealOptionKey const	mc_kt
RealOptionKey const	boltzmann_kt
RealOptionKey const	mm_bend_weight
BooleanOptionKey const	trajectory
BooleanOptionKey const	trajectory_gz
IntegerOptionKey const	trajectory_stride
StringOptionKey const	trajectory_file
StringOptionKey const	output_fasta
StringOptionKey const	output_stats
BooleanOptionKey const	ligand_mode
BooleanOptionKey const	initial_repack
BooleanOptionKey const	min_pack
BooleanOptionKey const	save_sequences
BooleanOptionKey const	save_structures
RealOptionKey const	ligand_prob
BooleanOptionKey const	fix_backbone
BooleanOptionKey const	uniform_backrub
BooleanOptionKey const	bias_sampling
BooleanOptionKey const	bump_check
RealOptionKey const	ligand_weight
StringOptionKey const	output_prefix
RealOptionKey const	walking_perturber_magnitude
RealOptionKey const	kic_loop_size
StringOptionKey const	kic_perturber
StringOptionKey const	backbone_mover
BooleanOptionKey const	repack_neighborhood
BooleanOptionKey const	exclude_nonclashing_positions

Variable Documentation

StringOptionKey const basic::options::OptionKeys::coupled_moves::backbone_mover

Referenced by add_rosetta_options_6(), UBQ_GTPase_disulfide_Mover::apply(), UBQ_E2Mover::apply(), and my_main().

BooleanOptionKey const basic::options::OptionKeys::coupled_moves::bias_sampling

Referenced by add_rosetta_options_6().

RealOptionKey const basic::options::OptionKeys::coupled_moves::boltzmann_kt

Referenced by add_rosetta_options_6().

BooleanOptionKey const basic::options::OptionKeys::coupled_moves::bump_check

Referenced by add_rosetta_options_6().

BooleanOptionKey const basic::options::OptionKeys::coupled_moves::coupled_moves

Referenced by add_rosetta_options_6(), and my_main().

BooleanOptionKey const basic::options::OptionKeys::coupled_moves::exclude_nonclashing_positions

Referenced by add_rosetta_options_6().

BooleanOptionKey const basic::options::OptionKeys::coupled_moves::fix_backbone

Referenced by add_rosetta_options_6().

BooleanOptionKey const basic::options::OptionKeys::coupled_moves::initial_repack

Referenced by add_rosetta_options_6(), and minimize_with_constraints().

RealOptionKey const basic::options::OptionKeys::coupled_moves::kic_loop_size

Referenced by add_rosetta_options_6(), and my_main().

StringOptionKey const basic::options::OptionKeys::coupled_moves::kic_perturber

Referenced by add_rosetta_options_6(), and my_main().

BooleanOptionKey const basic::options::OptionKeys::coupled_moves::ligand_mode

Referenced by add_rosetta_options_6().

RealOptionKey const basic::options::OptionKeys::coupled_moves::ligand_prob

Referenced by add_rosetta_options_6().

RealOptionKey const basic::options::OptionKeys::coupled_moves::ligand_weight

Referenced by add_rosetta_options_6().

RealOptionKey const basic::options::OptionKeys::coupled_moves::mc_kt

Referenced by add_rosetta_options_6().

BooleanOptionKey const basic::options::OptionKeys::coupled_moves::min_pack

Referenced by add_rosetta_options_6(), and main().

RealOptionKey const basic::options::OptionKeys::coupled_moves::mm_bend_weight

Referenced by add_rosetta_options_6().

IntegerOptionKey const basic::options::OptionKeys::coupled_moves::ntrials

Referenced by add_rosetta_options_6(), and my_main().

IntegerOptionKey const basic::options::OptionKeys::coupled_moves::number_ligands

Referenced by add_rosetta_options_6().

StringOptionKey const basic::options::OptionKeys::coupled_moves::output_fasta

Referenced by add_rosetta_options_6().

StringOptionKey const basic::options::OptionKeys::coupled_moves::output_prefix

Referenced by add_rosetta_options_6(), main(), and processRegions().

StringOptionKey const basic::options::OptionKeys::coupled_moves::output_stats

Referenced by add_rosetta_options_6().

BooleanOptionKey const basic::options::OptionKeys::coupled_moves::repack_neighborhood

Referenced by add_rosetta_options_6(), and my_main().

BooleanOptionKey const basic::options::OptionKeys::coupled_moves::save_sequences

Referenced by add_rosetta_options_6().

BooleanOptionKey const basic::options::OptionKeys::coupled_moves::save_structures

Referenced by add_rosetta_options_6().

BooleanOptionKey const basic::options::OptionKeys::coupled_moves::trajectory

Referenced by add_rosetta_options_6().

StringOptionKey const basic::options::OptionKeys::coupled_moves::trajectory_file

Referenced by add_rosetta_options_6().

BooleanOptionKey const basic::options::OptionKeys::coupled_moves::trajectory_gz

Referenced by add_rosetta_options_6().

IntegerOptionKey const basic::options::OptionKeys::coupled_moves::trajectory_stride

Referenced by add_rosetta_options_6().

BooleanOptionKey const basic::options::OptionKeys::coupled_moves::uniform_backrub

Referenced by add_rosetta_options_6().

RealOptionKey const basic::options::OptionKeys::coupled_moves::walking_perturber_magnitude

Referenced by add_rosetta_options_6(), and my_main().