pyrosetta.bindings.utility Namespace Reference

Functions
def	bind_method
def	bind_property
def	bind_classmethod
def	slice_1base_indicies

Function Documentation

def pyrosetta.bindings.utility.bind_classmethod

(

class_

)

bind_classmethod is to be used as a decorator for binding class methods
onto classes which are defined in C++. This functionality is
necessary because C++ objects are not explicitly defined in the python code.
Therefore, monkey patching is the only option.  Binding class methods
should be limited to python specific challenges.

Referenced by pyrosetta.bindings.homogeneous_transform.from_RT(), and pyrosetta.bindings.homogeneous_transform.is_homog_xform().

def pyrosetta.bindings.utility.bind_method

(

class_

)

bind_method is to be used as a decorator for binding methods
onto classes which are defined in C++. This functionality is
necessary because C++ objects are not explicitly defined in the python code.
Therefore, dynamically defining is the only option.  Binding methods
should be limited to python specific challenges.

Referenced by pyrosetta.bindings.pose.__getitem__(), pyrosetta.bindings.pose.__iter__(), pyrosetta.bindings.pose.__len__(), pyrosetta.bindings.pose.__pose_getstate__(), pyrosetta.bindings.pose.__scores_accessor(), pyrosetta.bindings.energies._residue_selection_to_1ind(), pyrosetta.bindings.energies.active_total_energies(), pyrosetta.bindings.pose.apply_transform(), pyrosetta.bindings.homogeneous_transform.from_array(), pyrosetta.bindings.pose.get_hbonds(), pyrosetta.bindings.pose.pdb_rsd(), pyrosetta.bindings.energies.residue_onebody_energies_array(), pyrosetta.bindings.energies.residue_pair_energies_array(), pyrosetta.bindings.energies.residue_total_energies_array(), pyrosetta.bindings.pose.rotate(), pyrosetta.bindings.energies.total_energies_array(), and pyrosetta.bindings.pose.translate().

def pyrosetta.bindings.utility.bind_property

(

class_

)

bind_property is to be used as a decorator for binding properties
onto classes which are defined in C++. This functionality is
necessary because C++ objects are not explicitly defined in the python code.
Therefore, dynamically defining is the only option.  Binding properties
should be limited to python specific challenges.

Referenced by pyrosetta.bindings.pose.PoseResidueAccessor.__imul__(), pyrosetta.bindings.pose.PoseResidueLabelAccessor.__repr__(), and pyrosetta.bindings.pose.PoseScoreAccessor._repr_pretty_().

def pyrosetta.bindings.utility.slice_1base_indicies	(		slice_,
			size
	)

Convert a slice to 1-based indicies.
takes an instance of the built-in slice object and a length of a slice-able
object and returns index 1 compatible indices. Think of this as
`slice.vector1_indices(size)` which is analogous to `slice.indices(size)`.

Referenced by pyrosetta.bindings.pose.PoseResidueAccessor.__getitem__(), pyrosetta.bindings.pose.PoseResidueLabelAccessor.__getitem__(), and test.T190_Bindings_Utility.test_property().