DRRAFTER_util.py File Reference

Namespaces
	DRRAFTER_util

Functions
def	DRRAFTER_util.get_helix_stems
def	DRRAFTER_util.graph_from_ss
def	DRRAFTER_util.find_pairs
def	DRRAFTER_util.residue_graph_from_ss
def	DRRAFTER_util.pdbslice
def	DRRAFTER_util.matches
def	DRRAFTER_util.make_tag
def	DRRAFTER_util.make_tag_with_dashes
def	DRRAFTER_util.parse_tag
def	DRRAFTER_util.get_sequences
def	DRRAFTER_util.read_pdb
def	DRRAFTER_util.read_pdb_with_segid
def	DRRAFTER_util.better_reorder_pdb
def	DRRAFTER_util.rna_helix
def	DRRAFTER_util.get_resnum_chain
def	DRRAFTER_util.renumber_pdb
def	DRRAFTER_util.get_ints
def	DRRAFTER_util.easy_cat
def	DRRAFTER_util.cat_outfiles
def	DRRAFTER_util.extract_lowscore_decoys

Variables
dictionary	DRRAFTER_util.hetatm_map = { '5BU':' U', ' MG':' MG', 'OMC':' C', '5MC':' C', 'CCC':' C', ' DC':' C', 'CBR':' C', 'CBV':' C', 'CB2':' C', '2MG':' G', 'H2U':'H2U', 'PSU':'PSU', '5MU':' U', 'OMG':' G', '7MG':' G', '1MG':' G', 'GTP':' G', 'AMP':' A', ' YG':' G', '1MA':' A', 'M2G':' G', 'YYG':' G', ' DG':' G', 'G46':' G', ' IC':' IC',' IG':' IG', 'ZMP':'ZMP' }
dictionary	DRRAFTER_util.longer_names