basic::options::OptionKeys::cp Namespace Reference

Variables
BooleanOptionKey const	cp
RealOptionKey const	cutoff
StringOptionKey const	relax_sfxn
StringOptionKey const	pack_sfxn
StringOptionKey const	minimizer_score_fxn
StringOptionKey const	output
IntegerOptionKey const	ncycles
IntegerOptionKey const	max_failures
BooleanOptionKey const	print_reports
StringOptionKey const	vipReportFile
StringOptionKey const	exclude_file
StringOptionKey const	relax_mover
BooleanOptionKey const	skip_relax
BooleanOptionKey const	local_relax
BooleanOptionKey const	print_intermediate_pdbs
BooleanOptionKey const	use_unrelaxed_starting_points
BooleanOptionKey const	easy_vip_acceptance

Variable Documentation

BooleanOptionKey const basic::options::OptionKeys::cp::cp

Referenced by add_rosetta_options_6(), numeric::xyzMatrix< T >::cols(), numeric::cubic_polynomial_from_spline(), utility::io::icstream::get(), utility::io::izstream::get(), utility::io::icstream::read(), utility::io::izstream::read(), utility::io::icstream::readsome(), and utility::io::izstream::readsome().

RealOptionKey const basic::options::OptionKeys::cp::cutoff

Referenced by add_rosetta_options_6(), numeric::kdtree::KDPointList::distance_cutoff(), find_residues_around_mutation(), main(), register_options(), run(), RunPepSpec(), BacksideHbondFinderMover::set_atom_sasa_cutoff(), BacksideHbondFinderMover::set_neighbor_distance_cutoff(), and numeric::interpolation::spline_from_file().

BooleanOptionKey const basic::options::OptionKeys::cp::easy_vip_acceptance

Referenced by add_rosetta_options_6(), and main().

StringOptionKey const basic::options::OptionKeys::cp::exclude_file

Referenced by add_rosetta_options_6().

BooleanOptionKey const basic::options::OptionKeys::cp::local_relax

Referenced by add_rosetta_options_6().

IntegerOptionKey const basic::options::OptionKeys::cp::max_failures

Referenced by add_rosetta_options_6(), and main().

StringOptionKey const basic::options::OptionKeys::cp::minimizer_score_fxn

Referenced by add_rosetta_options_6().

IntegerOptionKey const basic::options::OptionKeys::cp::ncycles

Referenced by add_rosetta_options_6(), and main().

StringOptionKey const basic::options::OptionKeys::cp::output

Referenced by add_rosetta_options_6(), IdentifyCDRClusters::apply(), numeric::Calculator::compute(), numeric::FArray_to_vector_of_xyzvectors(), main(), match_main(), numeric::operator<<(), zinc_stats::ZincStatisticGenerator::output_file(), save_per_residue_scores(), utility::tag::XMLValidatorImpl::set_schema(), GlycanClashCheckMover::show(), DockGlycansProtocol::show(), numeric::xyzVector< core::Real >::show(), numeric::xyzMatrix< T >::show(), utility::tag::test_if_schema_is_valid(), utility::tag::XMLValidatorImpl::validate_xml_against_schema(), utility::tag::validate_xml_against_xsd(), numeric::vector_of_xyzvectors_to_FArray(), and numeric::xyzmatrix_to_FArray().

StringOptionKey const basic::options::OptionKeys::cp::pack_sfxn

Referenced by add_rosetta_options_6().

BooleanOptionKey const basic::options::OptionKeys::cp::print_intermediate_pdbs

Referenced by add_rosetta_options_6(), and main().

BooleanOptionKey const basic::options::OptionKeys::cp::print_reports

Referenced by add_rosetta_options_6().

StringOptionKey const basic::options::OptionKeys::cp::relax_mover

Referenced by add_rosetta_options_6(), and main().

StringOptionKey const basic::options::OptionKeys::cp::relax_sfxn

Referenced by add_rosetta_options_6(), and main().

BooleanOptionKey const basic::options::OptionKeys::cp::skip_relax

Referenced by add_rosetta_options_6(), helix_from_sequence(), and skipping_relax().

BooleanOptionKey const basic::options::OptionKeys::cp::use_unrelaxed_starting_points

Referenced by add_rosetta_options_6(), and main().

StringOptionKey const basic::options::OptionKeys::cp::vipReportFile

Referenced by add_rosetta_options_6().