D080_Loop_modeling.py File Reference

Namespaces
	demo.D080_Loop_modeling

Functions
def	demo.D080_Loop_modeling.sample_single_loop_modeling
	Methods. More...

Variables
tuple	demo.D080_Loop_modeling.parser = optparse.OptionParser()
	INTERPRETING RESULTS. More...
string	demo.D080_Loop_modeling.default = '../test/data/test_in.pdb'
string	demo.D080_Loop_modeling.help = 'the PDB file containing the loop to remodel'
	demo.D080_Loop_modeling.pdb_filename = options.pdb_filename
tuple	demo.D080_Loop_modeling.loop_begin = int(options.loop_begin)
tuple	demo.D080_Loop_modeling.loop_end = int(options.loop_end)
tuple	demo.D080_Loop_modeling.loop_cutpoint = int(options.loop_cutpoint)
	demo.D080_Loop_modeling.frag_filename = options.frag_filename
tuple	demo.D080_Loop_modeling.frag_length = int(options.frag_length)
tuple	demo.D080_Loop_modeling.outer_cycles_low = int(options.outer_cycles_low)
tuple	demo.D080_Loop_modeling.inner_cycles_low = int(options.inner_cycles_low)
tuple	demo.D080_Loop_modeling.init_temp_low = float(options.init_temp_low)
tuple	demo.D080_Loop_modeling.final_temp_low = float(options.final_temp_low)
tuple	demo.D080_Loop_modeling.outer_cycles_high = int(options.outer_cycles_high)
tuple	demo.D080_Loop_modeling.inner_cycles_high = int(options.inner_cycles_high)
tuple	demo.D080_Loop_modeling.init_temp_high = float(options.init_temp_high)
tuple	demo.D080_Loop_modeling.final_temp_high = float(options.final_temp_high)
tuple	demo.D080_Loop_modeling.jobs = int(options.jobs)
	demo.D080_Loop_modeling.job_output = options.job_output