pyrosetta.distributed.cluster.multiprocessing Namespace Reference

Functions
def	user_protocol
def	run_protocol
def	get_target_results_kwargs
def	target
def	user_spawn_thread

Variables
string	__author__ = "Jason C. Klima"
string	__email__ = "klima.jason@gmail.com"
tuple	Q = TypeVar("Q", bound=billiard.Queue)
tuple	P = TypeVar("P", bound=billiard.context.Process)

Function Documentation

def pyrosetta.distributed.cluster.multiprocessing.get_target_results_kwargs

(

q

)

References pyrosetta.distributed.cluster.converters._parse_empty_queue(), pyrosetta.distributed.cluster.converters._parse_target_results(), and pyrosetta.distributed.cluster.multiprocessing.target().

Referenced by pyrosetta.distributed.cluster.multiprocessing.run_protocol(), and pyrosetta.distributed.cluster.multiprocessing.user_spawn_thread().

def pyrosetta.distributed.cluster.multiprocessing.run_protocol

(

protocol

)

References pyrosetta.distributed.cluster.converters._parse_protocol_results(), pyrosetta.distributed.cluster.multiprocessing.get_target_results_kwargs(), and pyrosetta.distributed.cluster.multiprocessing.user_protocol().

Referenced by pyrosetta.distributed.cluster.multiprocessing.target(), and pyrosetta.distributed.cluster.multiprocessing.user_protocol().

def pyrosetta.distributed.cluster.multiprocessing.target

(

protocol

)

References pyrosetta.distributed.cluster.validators._validate_residue_type_sets(), pyrosetta.distributed.cluster.multiprocessing.run_protocol(), and pyrosetta.distributed.cluster.multiprocessing.user_spawn_thread().

Referenced by pyrosetta.distributed.cluster.multiprocessing.get_target_results_kwargs().

def pyrosetta.distributed.cluster.multiprocessing.user_protocol

(

pose

)

References basic::options::OptionKeys::docking::ligand.protocol, and pyrosetta.distributed.cluster.multiprocessing.run_protocol().

Referenced by pyrosetta.distributed.cluster.multiprocessing.run_protocol().

def pyrosetta.distributed.cluster.multiprocessing.user_spawn_thread

(

protocol

)

References pyrosetta.distributed.cluster.base._get_packed_pose_kwargs_pairs_list(), and pyrosetta.distributed.cluster.multiprocessing.get_target_results_kwargs().

Referenced by pyrosetta.distributed.cluster.multiprocessing.target().

Variable Documentation

string pyrosetta.distributed.cluster.multiprocessing.__author__ = "Jason C. Klima"

string pyrosetta.distributed.cluster.multiprocessing.__email__ = "klima.jason@gmail.com"

tuple pyrosetta.distributed.cluster.multiprocessing.P = TypeVar("P", bound=billiard.context.Process)

Referenced by numeric::deriv.angle_p1_deriv(), numeric::deriv.angle_p1_p2_p3_deriv(), numeric::deriv.angle_p2_deriv(), numeric::deriv.dihedral_deriv_second(), numeric::deriv.dihedral_p1_cosine_deriv(), numeric::deriv.dihedral_p1_cosine_deriv_first(), numeric::deriv.dihedral_p2_cosine_deriv(), numeric::deriv.dihedral_p2_cosine_deriv_first(), numeric::deriv.distance_f1_f2_deriv(), numeric::linear_algebra.minimum_bounding_ellipse(), numeric::geometry::hashing::bin_index_hasher.operator()(), numeric::deriv.p1_theta_deriv(), and numeric::deriv.x_and_dtheta_dx().

tuple pyrosetta.distributed.cluster.multiprocessing.Q = TypeVar("Q", bound=billiard.Queue)

Referenced by utility::graph.breadth_first_search_prune(), utility::graph.breadth_first_visit_prune(), numeric::kinematic_closure.chainParams(), numeric::kinematic_closure::radians.chainParams(), numeric::kinematic_closure.chainTORS(), numeric::kinematic_closure::radians.chainTORS(), numeric::kinematic_closure.chainXYZ(), numeric::kinematic_closure::radians.chainXYZ(), numeric::kinematic_closure.dixon_sturm(), numeric::linear_algebra.minimum_bounding_ellipse(), multiclass_probability(), numeric::kinematic_closure.test_chainParams(), numeric::kinematic_closure.test_chainTORS(), and numeric::kinematic_closure.test_chainXYZ().