basic::options::OptionKeys::stepwise::protein Namespace Reference

Variables
BooleanOptionKey const	protein
BooleanOptionKey const	global_optimize
BooleanOptionKey const	disable_sampling_of_loop_takeoff
BooleanOptionKey const	sample_beta
BooleanOptionKey const	ghost_loops
BooleanOptionKey const	centroid_screen
RealOptionKey const	centroid_score_diff_cut
StringOptionKey const	centroid_weights
RealOptionKey const	score_diff_cut
BooleanOptionKey const	filter_native_big_bins
BooleanOptionKey const	cluster_by_all_atom_rmsd
BooleanOptionKey const	centroid_output
IntegerOptionKey const	n_sample
IntegerOptionKey const	nstruct_centroid
BooleanOptionKey const	ccd_close
IntegerVectorOptionKey const	bridge_res
BooleanOptionKey const	cart_min
BooleanOptionKey const	move_jumps_between_chains
BooleanOptionKey const	use_packer_instead_of_rotamer_trials
BooleanOptionKey const	expand_loop_takeoff
BooleanOptionKey const	skip_coord_constraints
BooleanOptionKey const	allow_virtual_side_chains
BooleanOptionKey const	protein_prepack
StringOptionKey const	disulfide_file

Variable Documentation

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::allow_virtual_side_chains

Referenced by add_rosetta_options_14(), main(), and rebuild_test().

IntegerVectorOptionKey const basic::options::OptionKeys::stepwise::protein::bridge_res

Referenced by add_rosetta_options_14(), main(), and rebuild_test().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::cart_min

Referenced by add_rosetta_options_14(), and main().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::ccd_close

Referenced by add_rosetta_options_14(), and main().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::centroid_output

Referenced by add_rosetta_options_14(), and main().

RealOptionKey const basic::options::OptionKeys::stepwise::protein::centroid_score_diff_cut

Referenced by add_rosetta_options_14().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::centroid_screen

Referenced by add_rosetta_options_14().

StringOptionKey const basic::options::OptionKeys::stepwise::protein::centroid_weights

Referenced by add_rosetta_options_14(), and main().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::cluster_by_all_atom_rmsd

Referenced by add_rosetta_options_14(), cluster_outfile_test(), and main().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::disable_sampling_of_loop_takeoff

Referenced by add_rosetta_options_14(), and main().

StringOptionKey const basic::options::OptionKeys::stepwise::protein::disulfide_file

Referenced by add_rosetta_options_14(), initialize_native_pose(), main(), and rebuild_test().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::expand_loop_takeoff

Referenced by add_rosetta_options_14().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::filter_native_big_bins

Referenced by add_rosetta_options_14(), and main().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::ghost_loops

Referenced by add_rosetta_options_14(), and main().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::global_optimize

Referenced by add_rosetta_options_14(), and main().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::move_jumps_between_chains

Referenced by add_rosetta_options_14(), and main().

IntegerOptionKey const basic::options::OptionKeys::stepwise::protein::n_sample

Referenced by add_rosetta_options_14(), and main().

IntegerOptionKey const basic::options::OptionKeys::stepwise::protein::nstruct_centroid

Referenced by add_rosetta_options_14(), and main().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::protein

Referenced by add_rosetta_options_14(), and main().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::protein_prepack

Referenced by add_rosetta_options_14(), main(), and rebuild_test().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::sample_beta

Referenced by add_rosetta_options_14(), and main().

RealOptionKey const basic::options::OptionKeys::stepwise::protein::score_diff_cut

Referenced by add_rosetta_options_14(), and cluster_outfile_test().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::skip_coord_constraints

Referenced by add_rosetta_options_14().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::use_packer_instead_of_rotamer_trials

Referenced by add_rosetta_options_14(), and main().