SequenceSimilarityMetric.cc File Reference

compares the sequences of the native structure (using native flag) to the sequence of a given pose. More...

#include <core/simple_metrics/metrics/SequenceSimilarityMetric.hh>
#include <core/simple_metrics/simple_metric_creators.hh>
#include <core/simple_metrics/RealMetric.hh>
#include <core/simple_metrics/util.hh>
#include <core/sequence/Blosum62Map.hh>
#include <core/select/residue_selector/ResidueSelector.hh>
#include <core/select/residue_selector/util.hh>
#include <core/select/util.hh>
#include <core/pose/Pose.hh>
#include <core/pose/PDBInfo.hh>
#include <core/pose/ref_pose.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/Tracer.hh>
#include <basic/datacache/DataMap.hh>
#include <basic/citation_manager/UnpublishedModuleInfo.hh>
#include <utility/string_util.hh>
#include <utility/tag/Tag.hh>
#include <utility/pointer/memory.hh>
#include <utility/tag/XMLSchemaGeneration.hh>

Namespaces
	core
	A class for reading in the atom type properties.
	core::simple_metrics
	core::simple_metrics::metrics

Functions
static basic::Tracer	TR ("core.simple_metrics.metrics.SequenceSimilarityMetric")

Detailed Description

compares the sequences of the native structure (using native flag) to the sequence of a given pose.

Author

Jack Maguire, jackm.nosp@m.agui.nosp@m.re144.nosp@m.4@gm.nosp@m.ail.c.nosp@m.om

Function Documentation

static basic::Tracer TR ( "core.simple_metrics.metrics.SequenceSimilarityMetric"  )

static