LinkageConformerMover.cc File Reference

This code changes all of the dihedrals of a particular glycosidic linkage based on database info, essentially sampling carbohydrate dihedral conformers of two residues. More...

#include <protocols/carbohydrates/LinkageConformerMover.hh>
#include <protocols/carbohydrates/LinkageConformerMoverCreator.hh>
#include <core/chemical/carbohydrates/CarbohydrateInfoManager.hh>
#include <core/chemical/carbohydrates/CarbohydrateInfo.hh>
#include <core/id/types.hh>
#include <core/id/TorsionID.hh>
#include <core/chemical/AA.hh>
#include <core/chemical/ResidueType.hh>
#include <core/pose/Pose.hh>
#include <core/pose/selection.hh>
#include <core/pose/carbohydrates/util.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/kinematics/util.hh>
#include <core/select/residue_selector/ResidueSelector.hh>
#include <core/select/residue_selector/GlycanResidueSelector.hh>
#include <core/select/residue_selector/ReturnResidueSubsetSelector.hh>
#include <core/select/residue_selector/util.hh>
#include <core/conformation/carbohydrates/GlycanTreeSet.hh>
#include <protocols/moves/mover_schemas.hh>
#include <protocols/moves/MoverStatus.hh>
#include <protocols/simple_moves/BBDihedralSamplerMover.hh>
#include <protocols/simple_moves/bb_sampler/SugarBBSampler.hh>
#include <protocols/rosetta_scripts/util.hh>
#include <numeric/random/random.hh>
#include <numeric/random/WeightedSampler.hh>
#include <basic/Tracer.hh>
#include <basic/basic.hh>
#include <basic/citation_manager/CitationManager.hh>
#include <basic/citation_manager/CitationCollection.hh>
#include <basic/citation_manager/UnpublishedModuleInfo.hh>
#include <utility/tag/Tag.hh>
#include <utility/tag/XMLSchemaGeneration.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::carbohydrates

Functions
static basic::Tracer	TR ("protocols.carbohydrates.LinkageConformerMover")
std::ostream &	protocols::carbohydrates::operator<< (std::ostream &os, LinkageConformerMover const &mover)

Detailed Description

This code changes all of the dihedrals of a particular glycosidic linkage based on database info, essentially sampling carbohydrate dihedral conformers of two residues.

Author

Jared Adolf-Bryfogle (jadol.nosp@m.fbr@.nosp@m.gmail.nosp@m..com)

Labonte JWLab.nosp@m.onte.nosp@m.@jhu..nosp@m.edu

Function Documentation

static basic::Tracer TR ( "protocols.carbohydrates.LinkageConformerMover"  )

static