protocols::indexed_structure_store::SSHashedFragmentStore Member List

This is the complete list of members for protocols::indexed_structure_store::SSHashedFragmentStore, including all inherited members.

create_singleton_instance()	protocols::indexed_structure_store::SSHashedFragmentStore	privatestatic
generate_subset_residues_to_compare(numeric::Size loop_length, numeric::Size fragment_length, bool match_tail)	protocols::indexed_structure_store::SSHashedFragmentStore	private
get_fragment_coordinates(numeric::Size db_index, numeric::Size match_index)	protocols::indexed_structure_store::SSHashedFragmentStore
get_fragment_length()	protocols::indexed_structure_store::SSHashedFragmentStore
get_fragment_store(numeric::Size db_index)	protocols::indexed_structure_store::SSHashedFragmentStore
get_fragment_store()	protocols::indexed_structure_store::SSHashedFragmentStore
get_hashed_fragment_store()	protocols::indexed_structure_store::SSHashedFragmentStore
get_hits_below_rms(core::pose::Pose const &pose, numeric::Size resid, numeric::Real rms_threshold, utility::vector1< std::vector< numeric::Real > > &hits_cen, utility::vector1< numeric::Real > &hits_rms, utility::vector1< std::string > &hits_aa)	protocols::indexed_structure_store::SSHashedFragmentStore
get_valid_resid(core::pose::Pose const &pose, int resid)	protocols::indexed_structure_store::SSHashedFragmentStore
init_SS_stub_HashedFragmentStore()	protocols::indexed_structure_store::SSHashedFragmentStore
lookback(core::pose::Pose const &pose, numeric::Size resid)	protocols::indexed_structure_store::SSHashedFragmentStore
lookback(core::pose::Pose const &pose, numeric::Size resid, std::string frag_ss, bool find_closest)	protocols::indexed_structure_store::SSHashedFragmentStore
lookback_account_for_dssp_inaccuracy(core::pose::Pose const &pose, numeric::Size resid, bool find_closest, numeric::Real rms_threshold)	protocols::indexed_structure_store::SSHashedFragmentStore
lookback_account_for_dssp_inaccuracy(core::pose::Pose const &pose, numeric::Size resid, std::string frags_ss, bool find_closest, numeric::Real rms_threshold)	protocols::indexed_structure_store::SSHashedFragmentStore
lookback_account_for_dssp_inaccuracy(core::pose::Pose const &pose, numeric::Size resid, std::string frag_ss, numeric::Real &match_rmsd, numeric::Size &match_index, numeric::Size &match_ss_index)	protocols::indexed_structure_store::SSHashedFragmentStore
lookback_stub(std::vector< numeric::xyzVector< numeric::Real > > coordinates, char resTypeBeforeLoop, char resTypeAfterLoop, numeric::Size loop_length, numeric::Real &match_rmsd, numeric::Size &match_index, numeric::Size &match_ss_index)	protocols::indexed_structure_store::SSHashedFragmentStore
lookback_uncached_stub(std::vector< numeric::xyzVector< numeric::Real > > coordinates, numeric::Size stub_match_ss_index, numeric::Size loop_length, numeric::Real &match_rmsd, numeric::Size &match_index)	protocols::indexed_structure_store::SSHashedFragmentStore
max_rmsd_in_region(core::pose::Pose const &pose, utility::vector1< numeric::Size > resids)	protocols::indexed_structure_store::SSHashedFragmentStore
potential_valid_ss_strings(std::string frag_ss)	protocols::indexed_structure_store::SSHashedFragmentStore
set_threshold_distance(numeric::Real threshold_distance)	protocols::indexed_structure_store::SSHashedFragmentStore
SS_stub_HashedFragmentStoreIndex_	protocols::indexed_structure_store::SSHashedFragmentStore	private
SSHashedFragmentStore()	protocols::indexed_structure_store::SSHashedFragmentStore	private
SSHashedFragmentStore_	protocols::indexed_structure_store::SSHashedFragmentStore	private
utility::SingletonBase< SSHashedFragmentStore > class	protocols::indexed_structure_store::SSHashedFragmentStore	friend