| acknowledge_state_change(int new_state) | core::pack::interaction_graph::HPatchBackgroundEdge< V, E, G > | |
| acknowledge_substitution() | core::pack::interaction_graph::HPatchBackgroundEdge< V, E, G > | |
| alt_dots_cache_ | core::pack::interaction_graph::HPatchBackgroundEdge< V, E, G > | private |
| alt_state_exolap_hphobes_ | core::pack::interaction_graph::HPatchBackgroundEdge< V, E, G > | private |
| BackgroundEdgeListIter typedef | core::pack::interaction_graph::BackgroundToFirstClassEdge< V, E, G > | |
| BackgroundToFirstClassEdge(AdditionalBackgroundNodesInteractionGraph< V, E, G > *owner, int fc_node_index, int bg_node_index) | core::pack::interaction_graph::BackgroundToFirstClassEdge< V, E, G > | |
| bg_res_num_atoms_ | core::pack::interaction_graph::HPatchBackgroundEdge< V, E, G > | private |
| bgtfce_mark_edge_for_deletion() | core::pack::interaction_graph::BackgroundToFirstClassEdge< V, E, G > | inlineprotected |
| bgtfce_marked_for_deletion() | core::pack::interaction_graph::BackgroundToFirstClassEdge< V, E, G > | inline |
| count_dynamic_memory() const override | core::pack::interaction_graph::HPatchBackgroundEdge< V, E, G > | virtual |
| count_static_memory() const override | core::pack::interaction_graph::HPatchBackgroundEdge< V, E, G > | virtual |
| curr_dots_cache_ | core::pack::interaction_graph::HPatchBackgroundEdge< V, E, G > | private |
| curr_state_exolap_hphobes_ | core::pack::interaction_graph::HPatchBackgroundEdge< V, E, G > | private |
| get_atom_atom_overlaps_for_state(Size state) const | core::pack::interaction_graph::HPatchBackgroundEdge< V, E, G > | |
| get_background_node() const | core::pack::interaction_graph::BackgroundToFirstClassEdge< V, E, G > | inlineprotected |
| get_background_node_index() const | core::pack::interaction_graph::BackgroundToFirstClassEdge< V, E, G > | inline |
| get_first_class_node() const | core::pack::interaction_graph::BackgroundToFirstClassEdge< V, E, G > | inlineprotected |
| get_first_class_node_index() const | core::pack::interaction_graph::BackgroundToFirstClassEdge< V, E, G > | inline |
| get_hpatch_bg_node() const | core::pack::interaction_graph::HPatchBackgroundEdge< V, E, G > | inlineprotected |
| get_hpatch_node() const | core::pack::interaction_graph::HPatchBackgroundEdge< V, E, G > | inlineprotected |
| get_other_ind(FirstClassNode< V, E, G > *) const | core::pack::interaction_graph::BackgroundToFirstClassEdge< V, E, G > | |
| get_other_ind(BackgroundNode< V, E, G > *) const | core::pack::interaction_graph::BackgroundToFirstClassEdge< V, E, G > | |
| get_other_node(BackgroundNode< V, E, G > *) const | core::pack::interaction_graph::BackgroundToFirstClassEdge< V, E, G > | |
| get_other_node(FirstClassNode< V, E, G > *) const | core::pack::interaction_graph::BackgroundToFirstClassEdge< V, E, G > | |
| get_owner() const | core::pack::interaction_graph::BackgroundToFirstClassEdge< V, E, G > | inlineprotected |
| HPatchBackgroundEdge(AdditionalBackgroundNodesInteractionGraph< V, E, G > *owner, int first_class_node_index, int background_node_index) | core::pack::interaction_graph::HPatchBackgroundEdge< V, E, G > | |
| HPatchBackgroundEdge() | core::pack::interaction_graph::HPatchBackgroundEdge< V, E, G > | private |
| HPatchBackgroundEdge(HPatchBackgroundEdge< V, E, G > const &) | core::pack::interaction_graph::HPatchBackgroundEdge< V, E, G > | private |
| initialize_overlap_cache(RotamerDots const &bg_residue) | core::pack::interaction_graph::HPatchBackgroundEdge< V, E, G > | |
| node_states_coverage_of_bg_res_ | core::pack::interaction_graph::HPatchBackgroundEdge< V, E, G > | private |
| node_states_overlap_with_bg_res_ | core::pack::interaction_graph::HPatchBackgroundEdge< V, E, G > | private |
| nodes_alt_state_ | core::pack::interaction_graph::HPatchBackgroundEdge< V, E, G > | private |
| nodes_curr_state_ | core::pack::interaction_graph::HPatchBackgroundEdge< V, E, G > | private |
| operator=(HPatchBackgroundEdge< V, E, G > const &) | core::pack::interaction_graph::HPatchBackgroundEdge< V, E, G > | private |
| parent typedef | core::pack::interaction_graph::HPatchBackgroundEdge< V, E, G > | |
| prepare_for_simulated_annealing() override | core::pack::interaction_graph::HPatchBackgroundEdge< V, E, G > | virtual |
| prepared_for_simA_ | core::pack::interaction_graph::HPatchBackgroundEdge< V, E, G > | private |
| same_edge(int fc_node_index, int bg_node_index) const | core::pack::interaction_graph::BackgroundToFirstClassEdge< V, E, G > | |
| set_pos_in_node_edgevector(FirstClassNode< V, E, G > *caller, int pos) | core::pack::interaction_graph::BackgroundToFirstClassEdge< V, E, G > | |
| set_pos_in_node_edgevector(BackgroundNode< V, E, G > *caller, int pos) | core::pack::interaction_graph::BackgroundToFirstClassEdge< V, E, G > | |
| set_pos_in_owners_list(BackgroundEdgeListIter) | core::pack::interaction_graph::BackgroundToFirstClassEdge< V, E, G > | |
| update_state_at_neighbor(int alt_state) | core::pack::interaction_graph::HPatchBackgroundEdge< V, E, G > | |
| ~BackgroundToFirstClassEdge() | core::pack::interaction_graph::BackgroundToFirstClassEdge< V, E, G > | virtual |
| ~HPatchBackgroundEdge() override | core::pack::interaction_graph::HPatchBackgroundEdge< V, E, G > | |
1.8.7