core::energy_methods::DumpTrajectoryEnergy Member List

This is the complete list of members for core::energy_methods::DumpTrajectoryEnergy, including all inherited members.

atomic_interaction_cutoff() const	core::scoring::methods::WholeStructureEnergy	inlinevirtual
calculate_energy(utility::vector1< core::conformation::ResidueCOP > const &resvect, utility::vector1< core::Size > const &rotamer_ids, core::Size const substitution_position=0) const override	core::energy_methods::DumpTrajectoryEnergy	virtual
call_count_	core::energy_methods::DumpTrajectoryEnergy	mutableprivate
clean_up_residuearrayannealableenergy_after_packing(core::pose::Pose &pose) override	core::energy_methods::DumpTrajectoryEnergy	virtual
clone() const override	core::energy_methods::DumpTrajectoryEnergy	virtual
commit_considered_substitution()	core::scoring::annealing::ResidueArrayAnnealableEnergy	virtual
defines_high_order_terms(pose::Pose const &) const	core::scoring::methods::EnergyMethod	virtual
dump_as_gz_	core::energy_methods::DumpTrajectoryEnergy	private
dump_filename_	core::energy_methods::DumpTrajectoryEnergy	mutableprivate
dump_on_every_nth_call_	core::energy_methods::DumpTrajectoryEnergy	private
dump_pose(core::pose::Pose const &pose, bool const force=false) const	core::energy_methods::DumpTrajectoryEnergy	private
dump_prefix_	core::energy_methods::DumpTrajectoryEnergy	private
dumped_frames_	core::energy_methods::DumpTrajectoryEnergy	mutableprivate
DumpState enum name	core::energy_methods::DumpTrajectoryEnergy	private
DumpTrajectoryEnergy(core::scoring::methods::EnergyMethodOptions const &options)	core::energy_methods::DumpTrajectoryEnergy
DumpTrajectoryEnergy(DumpTrajectoryEnergy const &src)	core::energy_methods::DumpTrajectoryEnergy
EnergyMethod(EnergyMethodCreatorOP creator)	core::scoring::methods::EnergyMethod
eval_atom_derivative(id::AtomID const &id, pose::Pose const &pose, kinematics::DomainMap const &domain_map, ScoreFunction const &sfxn, EnergyMap const &emap, Vector &F1, Vector &F2) const	core::scoring::methods::EnergyMethod	virtual
finalize_after_derivatives(pose::Pose &, ScoreFunction const &) const	core::scoring::methods::EnergyMethod	virtual
finalize_after_minimizing(core::pose::Pose &pose) const override	core::energy_methods::DumpTrajectoryEnergy	virtual
finalize_total_energy(core::pose::Pose &pose, core::scoring::ScoreFunction const &sfxn, core::scoring::EnergyMap &total_energy) const override	core::energy_methods::DumpTrajectoryEnergy	virtual
IDLE enum value	core::energy_methods::DumpTrajectoryEnergy	private
indicate_required_context_graphs(utility::vector1< bool > &context_graphs_required) const override	core::energy_methods::DumpTrajectoryEnergy	virtual
method_type() const override	core::scoring::methods::WholeStructureEnergy	virtual
minimize_in_whole_structure_context(pose::Pose const &) const	core::scoring::methods::EnergyMethod	virtual
MINIMIZING enum value	core::energy_methods::DumpTrajectoryEnergy	private
PACKING enum value	core::energy_methods::DumpTrajectoryEnergy	private
parent typedef	core::scoring::methods::WholeStructureEnergy
parent1 typedef	core::energy_methods::DumpTrajectoryEnergy
parent2 typedef	core::energy_methods::DumpTrajectoryEnergy
prepare_rotamers_for_packing(pose::Pose const &, conformation::RotamerSetBase &) const	core::scoring::methods::EnergyMethod	virtual
provide_citation_info(basic::citation_manager::CitationCollectionList &) const	core::scoring::methods::EnergyMethod	virtual
requires_a_setup_for_scoring_for_residue_opportunity_during_regular_scoring(pose::Pose const &pose) const	core::scoring::methods::EnergyMethod	virtual
ResidueArrayAnnealableEnergy()	core::scoring::annealing::ResidueArrayAnnealableEnergy
ResidueArrayAnnealableEnergy(ResidueArrayAnnealableEnergy const &src)	core::scoring::annealing::ResidueArrayAnnealableEnergy
score_types() const	core::scoring::methods::EnergyMethod	inline
SCORING enum value	core::energy_methods::DumpTrajectoryEnergy	private
set_score_types(EnergyMethodCreatorOP creator)	core::scoring::methods::EnergyMethod	protected
set_up_residuearrayannealableenergy_for_packing(core::pose::Pose &pose, core::pack::rotamer_set::RotamerSets const &rotamersets, core::scoring::ScoreFunction const &sfxn) override	core::energy_methods::DumpTrajectoryEnergy	virtual
setup_for_derivatives(pose::Pose &pose, core::scoring::ScoreFunction const &sfxn) const override	core::energy_methods::DumpTrajectoryEnergy	virtual
setup_for_minimizing(pose::Pose &, core::scoring::ScoreFunction const &, kinematics::MinimizerMapBase const &) const override	core::energy_methods::DumpTrajectoryEnergy	virtual
setup_for_packing(pose::Pose &, utility::vector1< bool > const &, utility::vector1< bool > const &) const	core::scoring::methods::EnergyMethod	virtual
setup_for_packing_with_rotsets(pose::Pose &pose, pack_basic::RotamerSetsBaseOP const &rotsets, ScoreFunction const &sfxn) const	core::scoring::methods::EnergyMethod	virtual
setup_for_scoring(core::pose::Pose &pose, core::scoring::ScoreFunction const &sfxn) const override	core::energy_methods::DumpTrajectoryEnergy	virtual
setup_for_scoring_for_residue(conformation::Residue const &rsd, pose::Pose const &pose, ScoreFunction const &sfxn, basic::datacache::BasicDataCache &residue_data_cache) const	core::scoring::methods::EnergyMethod	virtual
show_additional_info(std::ostream &, pose::Pose &, bool) const	core::scoring::methods::EnergyMethod	virtual
start_new_activity(DumpState new_state) const	core::energy_methods::DumpTrajectoryEnergy	private
state_	core::energy_methods::DumpTrajectoryEnergy	mutableprivate
try_move_to_idle() const	core::energy_methods::DumpTrajectoryEnergy	private
update_residue_for_packing(pose::Pose &, Size resid) const	core::scoring::methods::EnergyMethod	virtual
version() const override	core::energy_methods::DumpTrajectoryEnergy	virtual
WholeStructureEnergy(EnergyMethodCreatorOP)	core::scoring::methods::WholeStructureEnergy
~DumpTrajectoryEnergy() override	core::energy_methods::DumpTrajectoryEnergy
~ResidueArrayAnnealableEnergy()	core::scoring::annealing::ResidueArrayAnnealableEnergy	virtual
~WholeStructureEnergy() override	core::scoring::methods::WholeStructureEnergy	inline