protocols::stepwise::sampler::rna::RNA_KinematicCloser Member List

This is the complete list of members for protocols::stepwise::sampler::rna::RNA_KinematicCloser, including all inherited members.

all_jacobians_	protocols::stepwise::sampler::rna::RNA_KinematicCloser	private
apply(core::pose::Pose &pose, core::Size const id) override	protocols::stepwise::sampler::rna::RNA_KinematicCloser	virtual
protocols::stepwise::sampler::StepWiseSamplerSized::apply(core::pose::Pose &pose) override	protocols::stepwise::sampler::StepWiseSamplerSized	inlinevirtual
atom_ids_	protocols::stepwise::sampler::rna::RNA_KinematicCloser	private
atoms_	protocols::stepwise::sampler::rna::RNA_KinematicCloser	private
b_ang_	protocols::stepwise::sampler::rna::RNA_KinematicCloser	private
b_len_	protocols::stepwise::sampler::rna::RNA_KinematicCloser	private
calculate_jacobians() const	protocols::stepwise::sampler::rna::RNA_KinematicCloser	inline
calculate_jacobians_	protocols::stepwise::sampler::rna::RNA_KinematicCloser	private
chainbreak_suite_	protocols::stepwise::sampler::rna::RNA_KinematicCloser	private
clear_info()	protocols::moves::Mover	inlinevirtual
clone() const	protocols::moves::Mover	virtual
create()	protocols::moves::Mover	virtual
db_ang_	protocols::stepwise::sampler::rna::RNA_KinematicCloser	private
db_len_	protocols::stepwise::sampler::rna::RNA_KinematicCloser	private
dof_ids_	protocols::stepwise::sampler::rna::RNA_KinematicCloser	private
dt_ang_	protocols::stepwise::sampler::rna::RNA_KinematicCloser	private
fast_forward()	protocols::stepwise::sampler::StepWiseSamplerSized	inlinevirtual
figure_out_dof_ids_and_offsets(core::pose::Pose const &pose)	protocols::stepwise::sampler::rna::RNA_KinematicCloser	private
figure_out_offset(core::id::DOF_ID const &dof_id, core::Real const original_torsion_value, core::pose::Pose const &pose)	protocols::stepwise::sampler::rna::RNA_KinematicCloser	private
fill_chainTORS(core::pose::Pose const &pose)	protocols::stepwise::sampler::rna::RNA_KinematicCloser	private
fresh_instance() const	protocols::moves::Mover	virtual
get_additional_output()	protocols::moves::Mover	virtual
get_all_jacobians() const	protocols::stepwise::sampler::rna::RNA_KinematicCloser	inline
get_current_job() const	protocols::moves::Mover
get_current_tag() const	protocols::moves::Mover	inline
get_input_pose() const	protocols::moves::Mover
get_jacobian(Pose &pose) const	protocols::stepwise::sampler::rna::RNA_KinematicCloser
get_last_move_status() const	protocols::moves::Mover
get_name() const override	protocols::stepwise::sampler::rna::RNA_KinematicCloser	inlinevirtual
get_native_pose() const	protocols::moves::Mover
get_self_ptr() const	protocols::moves::Mover	inline
get_self_ptr()	protocols::moves::Mover	inline
get_self_weak_ptr() const	protocols::moves::Mover	inline
get_self_weak_ptr()	protocols::moves::Mover	inline
get_type() const	protocols::moves::Mover	inline
id() const	protocols::stepwise::sampler::StepWiseSamplerSized	inline
id_	protocols::stepwise::sampler::StepWiseSamplerSized	protected
info()	protocols::moves::Mover	inlinevirtual
info() const	protocols::moves::Mover	inlinevirtual
init() override	protocols::stepwise::sampler::rna::RNA_KinematicCloser	virtual
init(const Pose &pose_current, const Pose &pose_closed, bool use_pose_closed=true)	protocols::stepwise::sampler::rna::RNA_KinematicCloser
init_pose_	protocols::stepwise::sampler::rna::RNA_KinematicCloser	private
is_init() const	protocols::toolbox::SamplerPlusPlus	inlineprotected
is_TNA_	protocols::stepwise::sampler::rna::RNA_KinematicCloser	private
last_proposal_density_ratio()	protocols::moves::Mover	inlinevirtual
Mover()	protocols::moves::Mover
Mover(std::string const &type_name)	protocols::moves::Mover
moving_suite_	protocols::stepwise::sampler::rna::RNA_KinematicCloser	private
name()	protocols::moves::Mover	inlinestatic
not_end() const override	protocols::stepwise::sampler::StepWiseSamplerSized	virtual
nsol_	protocols::stepwise::sampler::rna::RNA_KinematicCloser	private
offset_save_	protocols::stepwise::sampler::rna::RNA_KinematicCloser	private
operator++() override	protocols::stepwise::sampler::StepWiseSamplerSized	virtual
operator=(const RNA_KinematicCloser &)	protocols::stepwise::sampler::rna::RNA_KinematicCloser	private
output_chainTORS() const	protocols::stepwise::sampler::rna::RNA_KinematicCloser	private
parse_my_tag(TagCOP tag, basic::datacache::DataMap &data)	protocols::moves::Mover	virtual
pivot_ids_	protocols::stepwise::sampler::rna::RNA_KinematicCloser	private
Pose typedef	protocols::moves::Mover
PoseCOP typedef	protocols::moves::Mover
provide_citation_info(basic::citation_manager::CitationCollectionList &) const	protocols::moves::Mover	virtual
random() const	protocols::stepwise::sampler::StepWiseSampler	inlinevirtual
register_options()	protocols::moves::Mover	inlinestatic
reinitialize_for_each_job() const	protocols::moves::Mover	virtual
reinitialize_for_new_input() const	protocols::moves::Mover	virtual
reset() override	protocols::stepwise::sampler::StepWiseSamplerSized	virtual
reset_status()	protocols::moves::Mover
RNA_KinematicCloser(core::pose::Pose const &init_pose, core::Size const moving_suite, core::Size const chainbreak_suite, bool const is_TNA_=false)	protocols::stepwise::sampler::rna::RNA_KinematicCloser
RNA_KinematicCloser(const RNA_KinematicCloser &)	protocols::stepwise::sampler::rna::RNA_KinematicCloser	private
SamplerPlusPlus()	protocols::toolbox::SamplerPlusPlus	inline
set_and_reinit(T &params, T const &setting)	protocols::toolbox::SamplerPlusPlus	inlineprotected
set_calculate_jacobians(bool const &setting)	protocols::stepwise::sampler::rna::RNA_KinematicCloser	inline
set_current_job(protocols::jobdist::BasicJobCOP job)	protocols::moves::Mover
set_current_tag(std::string const &new_tag)	protocols::moves::Mover	inlinevirtual
set_id(core::Size const setting)	protocols::stepwise::sampler::StepWiseSamplerSized	inlinevirtual
set_init(bool const setting)	protocols::toolbox::SamplerPlusPlus	inlineprotected
set_input_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_last_move_status(MoverStatus status)	protocols::moves::Mover	protected
set_native_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_random(bool const setting)	protocols::stepwise::sampler::StepWiseSampler	inlinevirtual
set_type(std::string const &setting)	protocols::moves::Mover	inline
set_verbose(bool const setting)	protocols::stepwise::sampler::rna::RNA_KinematicCloser	inline
show(std::ostream &out, core::Size const indent=0) const override	protocols::stepwise::sampler::StepWiseSamplerSized	inlinevirtual
protocols::moves::Mover::show(std::ostream &output=std::cout) const	protocols::moves::Mover	virtual
size() const override	protocols::stepwise::sampler::rna::RNA_KinematicCloser	inlinevirtual
StepWiseSampler()	protocols::stepwise::sampler::StepWiseSampler	inline
StepWiseSamplerSized()	protocols::stepwise::sampler::StepWiseSamplerSized
Strings typedef	protocols::moves::Mover
t_ang_	protocols::stepwise::sampler::rna::RNA_KinematicCloser	private
TagCOP typedef	protocols::moves::Mover
test_move(Pose &pose)	protocols::moves::Mover	inlinevirtual
TorsionList typedef	protocols::toolbox::SamplerPlusPlus
type() const override	protocols::stepwise::sampler::rna::RNA_KinematicCloser	inlinevirtual
protocols::moves::Mover::type(const std::string &type_in)	protocols::moves::Mover	inline
verbose_	protocols::stepwise::sampler::rna::RNA_KinematicCloser	private
~RNA_KinematicCloser() override	protocols::stepwise::sampler::rna::RNA_KinematicCloser
~SamplerPlusPlus() override	protocols::toolbox::SamplerPlusPlus	inline
~StepWiseSampler() override	protocols::stepwise::sampler::StepWiseSampler	inline
~StepWiseSamplerSized() override	protocols::stepwise::sampler::StepWiseSamplerSized