protocols::fold_from_loops::movers Namespace Reference

Classes
class	AlignByResidueSelectorMover
	Adds constraints generated by ConstraintGenerators to a pose. More...
class	AlignByResidueSelectorMoverCreator
class	DisplayPoseLabelsMover
	Adds constraints generated by ConstraintGenerators to a pose. More...
class	DisplayPoseLabelsMoverCreator
class	LabelPoseFromResidueSelectorMover
	Adds constraints generated by ConstraintGenerators to a pose. More...
class	LabelPoseFromResidueSelectorMoverCreator
class	MoveMapFactoryToNamedMoveMapMover
	Adds constraints generated by ConstraintGenerators to a pose. More...
class	MoveMapFactoryToNamedMoveMapMoverCreator
class	NubInitioLoopClosureMover
	Adds constraints generated by ConstraintGenerators to a pose. More...
class	NubInitioLoopClosureMoverCreator
class	ReleaseConstraintFromResidueMover
	Adds constraints generated by ConstraintGenerators to a pose. More...
class	ReleaseConstraintFromResidueMoverCreator
class	ResidueLabelsToPymolSelectionMover
	Adds constraints generated by ConstraintGenerators to a pose. More...
class	ResidueLabelsToPymolSelectionMoverCreator
class	SavePDBInfoMover
	Adds constraints generated by ConstraintGenerators to a pose. More...
class	SavePDBInfoMoverCreator
class	SplitAndMixPoseMover
class	SplitAndMixPoseMoverCreator
	RosettaScripts factory for NubInitio. More...

Typedefs
typedef utility::pointer::shared_ptr < AlignByResidueSelectorMover >	AlignByResidueSelectorMoverOP
typedef utility::pointer::shared_ptr < AlignByResidueSelectorMover const >	AlignByResidueSelectorMoverCOP
typedef utility::pointer::shared_ptr < DisplayPoseLabelsMover >	DisplayPoseLabelsMoverOP
typedef utility::pointer::shared_ptr < DisplayPoseLabelsMover const >	DisplayPoseLabelsMoverCOP
typedef utility::pointer::shared_ptr < LabelPoseFromResidueSelectorMover >	LabelPoseFromResidueSelectorMoverOP
typedef utility::pointer::shared_ptr < LabelPoseFromResidueSelectorMover const >	LabelPoseFromResidueSelectorMoverCOP
typedef utility::pointer::shared_ptr < MoveMapFactoryToNamedMoveMapMover >	MoveMapFactoryToNamedMoveMapMoverOP
typedef utility::pointer::shared_ptr < MoveMapFactoryToNamedMoveMapMover const >	MoveMapFactoryToNamedMoveMapMoverCOP
typedef utility::pointer::shared_ptr < NubInitioLoopClosureMover >	NubInitioLoopClosureMoverOP
typedef utility::pointer::shared_ptr < NubInitioLoopClosureMover const >	NubInitioLoopClosureMoverCOP
typedef utility::pointer::shared_ptr < ReleaseConstraintFromResidueMover >	ReleaseConstraintFromResidueMoverOP
typedef utility::pointer::shared_ptr < ReleaseConstraintFromResidueMover const >	ReleaseConstraintFromResidueMoverCOP
typedef utility::pointer::shared_ptr < ResidueLabelsToPymolSelectionMover >	ResidueLabelsToPymolSelectionMoverOP
typedef utility::pointer::shared_ptr < ResidueLabelsToPymolSelectionMover const >	ResidueLabelsToPymolSelectionMoverCOP
typedef utility::pointer::shared_ptr < SavePDBInfoMover >	SavePDBInfoMoverOP
typedef utility::pointer::shared_ptr < SavePDBInfoMover const >	SavePDBInfoMoverCOP
typedef utility::pointer::shared_ptr < SplitAndMixPoseMover >	SplitAndMixPoseMoverOP
typedef utility::pointer::shared_ptr < SplitAndMixPoseMover const >	SplitAndMixPoseMoverCOP

Functions
utility::vector1 < numeric::xyzVector < core::Real > >	Ca_coord (core::pose::Pose const &pose, core::select::residue_selector::ResidueSubset const &positions)
static basic::Tracer	TR ("protocols.fold_from_loops.SplitAndMixPoseMover", basic::t_trace)

Typedef Documentation

typedef utility::pointer::shared_ptr< AlignByResidueSelectorMover const > protocols::fold_from_loops::movers::AlignByResidueSelectorMoverCOP

typedef utility::pointer::shared_ptr< AlignByResidueSelectorMover > protocols::fold_from_loops::movers::AlignByResidueSelectorMoverOP

typedef utility::pointer::shared_ptr< DisplayPoseLabelsMover const > protocols::fold_from_loops::movers::DisplayPoseLabelsMoverCOP

typedef utility::pointer::shared_ptr< DisplayPoseLabelsMover > protocols::fold_from_loops::movers::DisplayPoseLabelsMoverOP

typedef utility::pointer::shared_ptr< LabelPoseFromResidueSelectorMover const > protocols::fold_from_loops::movers::LabelPoseFromResidueSelectorMoverCOP

typedef utility::pointer::shared_ptr< LabelPoseFromResidueSelectorMover > protocols::fold_from_loops::movers::LabelPoseFromResidueSelectorMoverOP

typedef utility::pointer::shared_ptr< MoveMapFactoryToNamedMoveMapMover const > protocols::fold_from_loops::movers::MoveMapFactoryToNamedMoveMapMoverCOP

typedef utility::pointer::shared_ptr< MoveMapFactoryToNamedMoveMapMover > protocols::fold_from_loops::movers::MoveMapFactoryToNamedMoveMapMoverOP

typedef utility::pointer::shared_ptr< NubInitioLoopClosureMover const > protocols::fold_from_loops::movers::NubInitioLoopClosureMoverCOP

typedef utility::pointer::shared_ptr< NubInitioLoopClosureMover > protocols::fold_from_loops::movers::NubInitioLoopClosureMoverOP

typedef utility::pointer::shared_ptr< ReleaseConstraintFromResidueMover const > protocols::fold_from_loops::movers::ReleaseConstraintFromResidueMoverCOP

typedef utility::pointer::shared_ptr< ReleaseConstraintFromResidueMover > protocols::fold_from_loops::movers::ReleaseConstraintFromResidueMoverOP

typedef utility::pointer::shared_ptr< ResidueLabelsToPymolSelectionMover const > protocols::fold_from_loops::movers::ResidueLabelsToPymolSelectionMoverCOP

typedef utility::pointer::shared_ptr< ResidueLabelsToPymolSelectionMover > protocols::fold_from_loops::movers::ResidueLabelsToPymolSelectionMoverOP

typedef utility::pointer::shared_ptr< SavePDBInfoMover const > protocols::fold_from_loops::movers::SavePDBInfoMoverCOP

typedef utility::pointer::shared_ptr< SavePDBInfoMover > protocols::fold_from_loops::movers::SavePDBInfoMoverOP

typedef utility::pointer::shared_ptr< SplitAndMixPoseMover const > protocols::fold_from_loops::movers::SplitAndMixPoseMoverCOP

typedef utility::pointer::shared_ptr< SplitAndMixPoseMover > protocols::fold_from_loops::movers::SplitAndMixPoseMoverOP

Function Documentation

utility::vector1< numeric::xyzVector< core::Real > > protocols::fold_from_loops::movers::Ca_coord	(	core::pose::Pose const &	pose,
		core::select::residue_selector::ResidueSubset const &	positions
	)

References protocols::simple_filters::coords(), core::pose::Pose::residue(), TR(), and core::conformation::Residue::xyz().

Referenced by protocols::fold_from_loops::movers::AlignByResidueSelectorMover::apply().

static basic::Tracer protocols::fold_from_loops::movers::TR ( "protocols.fold_from_loops.SplitAndMixPoseMover"  , basic::t_trace    )

static

Referenced by protocols::fold_from_loops::movers::SplitAndMixPoseMover::adapt_order_to_pair(), protocols::fold_from_loops::movers::SavePDBInfoMover::apply(), protocols::fold_from_loops::movers::AlignByResidueSelectorMover::apply(), protocols::fold_from_loops::movers::ResidueLabelsToPymolSelectionMover::apply(), protocols::fold_from_loops::movers::LabelPoseFromResidueSelectorMover::apply(), protocols::fold_from_loops::movers::DisplayPoseLabelsMover::apply(), protocols::fold_from_loops::movers::NubInitioLoopClosureMover::apply(), protocols::fold_from_loops::movers::SplitAndMixPoseMover::apply(), protocols::fold_from_loops::movers::NubInitioLoopClosureMover::apply_closure_trust(), protocols::fold_from_loops::movers::LabelPoseFromResidueSelectorMover::apply_no_remarks(), protocols::fold_from_loops::movers::LabelPoseFromResidueSelectorMover::apply_remarks(), protocols::fold_from_loops::movers::SplitAndMixPoseMover::apply_without_merge(), Ca_coord(), protocols::fold_from_loops::movers::SplitAndMixPoseMover::count_segments(), protocols::fold_from_loops::movers::SplitAndMixPoseMover::fill_pair_list(), protocols::fold_from_loops::movers::SplitAndMixPoseMover::fix_ranges(), protocols::fold_from_loops::movers::NubInitioLoopClosureMover::make_final_tree(), protocols::fold_from_loops::movers::SavePDBInfoMover::parse_my_tag(), protocols::fold_from_loops::movers::NubInitioLoopClosureMover::parse_my_tag(), protocols::fold_from_loops::movers::DisplayPoseLabelsMover::print_data(), protocols::fold_from_loops::movers::NubInitioLoopClosureMover::repack(), protocols::fold_from_loops::movers::NubInitioLoopClosureMover::show_cutpoints(), and protocols::fold_from_loops::movers::SplitAndMixPoseMover::split_pose().