protocols::cyclic_peptide::PeptideInternalHbondsMetric Member List

This is the complete list of members for protocols::cyclic_peptide::PeptideInternalHbondsMetric, including all inherited members.

::PeptideInternalHbondsMetricTests class	protocols::cyclic_peptide::PeptideInternalHbondsMetric	friend
apply(std::string const &out_label, pose::Pose &pose, bool override_existing_data=false) const override	core::simple_metrics::RealMetric	virtual
core::simple_metrics::SimpleMetric::apply(pose::Pose &pose, std::string const &prefix="", std::string const &suffix="", bool override_existing_data=false) const	core::simple_metrics::SimpleMetric
backbone_backbone() const	protocols::cyclic_peptide::PeptideInternalHbondsMetric	inline
backbone_backbone_	protocols::cyclic_peptide::PeptideInternalHbondsMetric	private
backbone_sidechain() const	protocols::cyclic_peptide::PeptideInternalHbondsMetric	inline
backbone_sidechain_	protocols::cyclic_peptide::PeptideInternalHbondsMetric	private
cached_calculate(pose::Pose const &pose, bool use_cache, std::string prefix="", std::string suffix="", bool fail_on_missing_cache=true) const	core::simple_metrics::RealMetric
calculate(core::pose::Pose const &pose) const override	protocols::cyclic_peptide::PeptideInternalHbondsMetric	virtual
clone() const override	protocols::cyclic_peptide::PeptideInternalHbondsMetric	virtual
complex_type_generator_for_simple_metric(utility::tag::XMLSchemaDefinition &)	core::simple_metrics::SimpleMetric	static
configure_from_filter_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &data)	protocols::cyclic_peptide::PeptideInternalHbondsMetric
count_hbonds(core::pose::Pose const &original_pose, core::select::residue_selector::ResidueSubset const &selection) const	protocols::cyclic_peptide::PeptideInternalHbondsMetric	private
exclusion_distance() const	protocols::cyclic_peptide::PeptideInternalHbondsMetric	inline
exclusion_distance_	protocols::cyclic_peptide::PeptideInternalHbondsMetric	private
generate_allowed_partners(core::pose::Pose const &pose, utility::vector1< core::Size > const &selected_residues) const	protocols::cyclic_peptide::PeptideInternalHbondsMetric	private
get_custom_type() const	core::simple_metrics::SimpleMetric
get_final_sm_type() const	core::simple_metrics::SimpleMetric
get_metric_names() const override	core::simple_metrics::RealMetric	virtual
hbond_energy_cutoff() const	protocols::cyclic_peptide::PeptideInternalHbondsMetric	inline
hbond_energy_cutoff_	protocols::cyclic_peptide::PeptideInternalHbondsMetric	private
metric() const override	protocols::cyclic_peptide::PeptideInternalHbondsMetric	virtual
name() const override	protocols::cyclic_peptide::PeptideInternalHbondsMetric	virtual
name_static()	protocols::cyclic_peptide::PeptideInternalHbondsMetric	static
operator=(RealMetric const &)	core::simple_metrics::RealMetric
core::simple_metrics::SimpleMetric::operator=(SimpleMetric const &)	core::simple_metrics::SimpleMetric
parse_base_tag(utility::tag::TagCOP tag)	core::simple_metrics::SimpleMetric	virtual
parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &data) override	protocols::cyclic_peptide::PeptideInternalHbondsMetric	virtual
PeptideInternalHbondsMetric()=default	protocols::cyclic_peptide::PeptideInternalHbondsMetric
PeptideInternalHbondsMetric(PeptideInternalHbondsMetric const &)=default	protocols::cyclic_peptide::PeptideInternalHbondsMetric
provide_citation_info(basic::citation_manager::CitationCollectionList &) const override	protocols::cyclic_peptide::PeptideInternalHbondsMetric	virtual
provide_shared_xml_schema_elements(utility::tag::AttributeList &attlist)	protocols::cyclic_peptide::PeptideInternalHbondsMetric	static
provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd)	protocols::cyclic_peptide::PeptideInternalHbondsMetric	static
RealMetric()	core::simple_metrics::RealMetric
RealMetric(RealMetric const &other)	core::simple_metrics::RealMetric
report(std::ostream &outstream, core::pose::Pose const &pose) const	protocols::cyclic_peptide::PeptideInternalHbondsMetric
residue_selector() const	protocols::cyclic_peptide::PeptideInternalHbondsMetric	inline
residue_selector_	protocols::cyclic_peptide::PeptideInternalHbondsMetric	private
scorefxn() const	protocols::cyclic_peptide::PeptideInternalHbondsMetric	inline
scorefxn_	protocols::cyclic_peptide::PeptideInternalHbondsMetric	mutableprivate
set_custom_type(std::string const &custom_type)	core::simple_metrics::SimpleMetric
set_exclusion_distance(core::Size const setting)	protocols::cyclic_peptide::PeptideInternalHbondsMetric
set_hbond_energy_cutoff(core::Real const setting)	protocols::cyclic_peptide::PeptideInternalHbondsMetric
set_hbond_types(bool const backbone_backbone_setting, bool const backbone_sidechain_setting, bool const sidechain_sidechain_setting)	protocols::cyclic_peptide::PeptideInternalHbondsMetric
set_residue_selector(core::select::residue_selector::ResidueSelectorCOP const &res_selector_in)	protocols::cyclic_peptide::PeptideInternalHbondsMetric
set_scorefxn(core::scoring::ScoreFunctionCOP const &sfxn_in)	protocols::cyclic_peptide::PeptideInternalHbondsMetric
sidechain_sidechain() const	protocols::cyclic_peptide::PeptideInternalHbondsMetric	inline
sidechain_sidechain_	protocols::cyclic_peptide::PeptideInternalHbondsMetric	private
simple_metric_type() const	core::simple_metrics::SimpleMetric	inline
SimpleMetric(std::string const &simple_metric_type)	core::simple_metrics::SimpleMetric
SimpleMetric(SimpleMetric const &other)	core::simple_metrics::SimpleMetric
~PeptideInternalHbondsMetric() override=default	protocols::cyclic_peptide::PeptideInternalHbondsMetric
~RealMetric() override	core::simple_metrics::RealMetric
~SimpleMetric() override	core::simple_metrics::SimpleMetric