protocols::tcr::TCRmodel::tmpltinfo Struct Reference

tmpltinfo holds the template information for an individual tcr segment More...

#include <TCRmodel.hh>

Public Attributes
std::string	tid
std::string	tpdb
std::string	tseq
core::Real	tscore
core::pose::PoseOP	tpiece
utility::vector1< std::string >	tdb

Detailed Description

tmpltinfo holds the template information for an individual tcr segment

template pdb id(tid), pdb structure(tpdb), sequence(tseq), alignment score(tscore), pose(tpiece) and template databse used(tdb).

Member Data Documentation

utility::vector1<std::string> protocols::tcr::TCRmodel::tmpltinfo::tdb

Referenced by protocols::tcr::get_orientation_template_from_db(), protocols::tcr::initialize_template_db_files(), protocols::tcr::setup_cdr_template_from_db(), protocols::tcr::setup_fw_template_from_db(), and protocols::tcr::TCRmodel::setup_templates().

std::string protocols::tcr::TCRmodel::tmpltinfo::tid

Referenced by protocols::tcr::graft_cdr(), protocols::tcr::graft_framework(), protocols::tcr::TCRmodel::init_from_options(), protocols::tcr::setup_cdr_template(), protocols::tcr::setup_cdr_template_from_db(), protocols::tcr::setup_cdr_template_from_pdbid(), protocols::tcr::setup_fw_template(), protocols::tcr::setup_fw_template_from_db(), protocols::tcr::setup_fw_template_from_pdbid(), protocols::tcr::setup_orientation_template(), and protocols::tcr::setup_template_from_pdbfile().

std::string protocols::tcr::TCRmodel::tmpltinfo::tpdb

Referenced by protocols::tcr::TCRmodel::init_from_options(), protocols::tcr::setup_cdr_template(), protocols::tcr::setup_fw_template(), protocols::tcr::setup_orientation_template(), and protocols::tcr::setup_template_from_pdbfile().

core::pose::PoseOP protocols::tcr::TCRmodel::tmpltinfo::tpiece

Referenced by protocols::tcr::TCRmodel::build_graft_model(), protocols::tcr::dump_templates(), protocols::tcr::graft_cdr(), protocols::tcr::graft_framework(), and protocols::tcr::setup_template_from_pdbfile().

core::Real protocols::tcr::TCRmodel::tmpltinfo::tscore

Referenced by protocols::tcr::setup_cdr_template_from_db(), and protocols::tcr::setup_fw_template_from_db().

std::string protocols::tcr::TCRmodel::tmpltinfo::tseq

---

The documentation for this struct was generated from the following file:

• src/protocols/tcr/TCRmodel.hh