protocols::contact_map::ContactMap Member List

This is the complete list of members for protocols::contact_map::ContactMap, including all inherited members.

apply(Pose &pose) override	protocols::contact_map::ContactMap	virtual
clear_info()	protocols::moves::Mover	inlinevirtual
clone() const override	protocols::contact_map::ContactMap	virtual
column_names_	protocols::contact_map::ContactMap	private
ContactMap()	protocols::contact_map::ContactMap
ContactMap(ContactMap const &)	protocols::contact_map::ContactMap
contacts_	protocols::contact_map::ContactMap	private
create()	protocols::moves::Mover	virtual
distance_cutoff_	protocols::contact_map::ContactMap	private
distance_matrix_	protocols::contact_map::ContactMap	private
fill_contacts(core::select::residue_selector::ResidueSelector const &region, Pose const &pose)	protocols::contact_map::ContactMap
fill_contacts(core::select::residue_selector::ResidueSelector const &region1, core::select::residue_selector::ResidueSelector const &region2, Pose const &pose)	protocols::contact_map::ContactMap
fill_contacts_all_atom2(core::select::residue_selector::ResidueSelector const &region1, core::select::residue_selector::ResidueSelector const &region2, Pose const &pose)	protocols::contact_map::ContactMap
fresh_instance() const override	protocols::contact_map::ContactMap	virtual
get_additional_output()	protocols::moves::Mover	virtual
get_contact(core::Size row, core::Size col)	protocols::contact_map::ContactMap
get_current_job() const	protocols::moves::Mover
get_current_tag() const	protocols::moves::Mover	inline
get_input_pose() const	protocols::moves::Mover
get_last_move_status() const	protocols::moves::Mover
get_name() const override	protocols::contact_map::ContactMap	virtual
get_native_pose() const	protocols::moves::Mover
get_self_ptr() const	protocols::moves::Mover	inline
get_self_ptr()	protocols::moves::Mover	inline
get_self_weak_ptr() const	protocols::moves::Mover	inline
get_self_weak_ptr()	protocols::moves::Mover	inline
get_type() const	protocols::moves::Mover	inline
info()	protocols::moves::Mover	inlinevirtual
info() const	protocols::moves::Mover	inlinevirtual
last_proposal_density_ratio()	protocols::moves::Mover	inlinevirtual
models_per_file_	protocols::contact_map::ContactMap	private
Mover()	protocols::moves::Mover
Mover(std::string const &type_name)	protocols::moves::Mover
mover_name()	protocols::contact_map::ContactMap	static
n_poses_	protocols::contact_map::ContactMap	private
name()	protocols::moves::Mover	inlinestatic
output_matrix_	protocols::contact_map::ContactMap	private
output_prefix_	protocols::contact_map::ContactMap	private
parse_my_tag(TagCOP, basic::datacache::DataMap &) override	protocols::contact_map::ContactMap	virtual
parse_region_string(std::string const &) const	protocols::contact_map::ContactMap
Pose typedef	protocols::moves::Mover
PoseCOP typedef	protocols::moves::Mover
provide_citation_info(basic::citation_manager::CitationCollectionList &) const	protocols::moves::Mover	virtual
provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd)	protocols::contact_map::ContactMap	static
reference_pose_	protocols::contact_map::ContactMap	private
region1_	protocols::contact_map::ContactMap	private
region2_	protocols::contact_map::ContactMap	private
region2_all_atom_	protocols::contact_map::ContactMap	private
register_options()	protocols::moves::Mover	inlinestatic
reinitialize_for_each_job() const	protocols::moves::Mover	virtual
reinitialize_for_new_input() const	protocols::moves::Mover	virtual
reset()	protocols::contact_map::ContactMap
reset_count_	protocols::contact_map::ContactMap	private
reset_status()	protocols::moves::Mover
row_format_	protocols::contact_map::ContactMap	private
row_names_	protocols::contact_map::ContactMap	private
set_current_job(protocols::jobdist::BasicJobCOP job)	protocols::moves::Mover
set_current_tag(std::string const &new_tag)	protocols::moves::Mover	inlinevirtual
set_distance_cutoff(core::Real cutoff)	protocols::contact_map::ContactMap	inline
set_distance_matrix(bool setting)	protocols::contact_map::ContactMap	inline
set_input_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_last_move_status(MoverStatus status)	protocols::moves::Mover	protected
set_models_per_file(core::Size setting)	protocols::contact_map::ContactMap	inline
set_native_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_output_prefix(std::string prefix)	protocols::contact_map::ContactMap	inline
set_reference_pose(core::pose::PoseCOP setting)	protocols::contact_map::ContactMap	inline
set_region2_all_atom(bool setting)	protocols::contact_map::ContactMap	inline
set_regions(core::select::residue_selector::ResidueSelectorCOP region1, core::select::residue_selector::ResidueSelectorCOP region2=nullptr)	protocols::contact_map::ContactMap	inline
set_row_format(bool setting)	protocols::contact_map::ContactMap	inline
set_type(std::string const &setting)	protocols::moves::Mover	inline
show(std::ostream &output=std::cout) const	protocols::moves::Mover	virtual
Strings typedef	protocols::moves::Mover
TagCOP typedef	protocols::moves::Mover
test_move(Pose &pose) override	protocols::contact_map::ContactMap	inlinevirtual
type(const std::string &type_in)	protocols::moves::Mover	inline
type() const	protocols::moves::Mover	inline
write_to_file(std::string filename="")	protocols::contact_map::ContactMap
write_to_stream(std::ostream &output_stream)	protocols::contact_map::ContactMap
~ContactMap() override	protocols::contact_map::ContactMap