core::scoring::hbonds::NPDHBondSet Member List

This is the complete list of members for core::scoring::hbonds::NPDHBondSet, including all inherited members.

acc_bbg_in_bb_bb_hbond(Size const residue) const	core::scoring::hbonds::HBondSet
allow_hbond(Size const index) const	core::scoring::hbonds::HBondSet
allow_hbond(HBond const &hbond) const	core::scoring::hbonds::HBondSet
append_hbond(Size const dhatm, conformation::Residue const &don_rsd, Size const aatm, conformation::Residue const &acc_rsd, HBEvalTuple const &hbe_tuple, Real const energy, Real const weight, HBondDerivs const &deriv)	core::scoring::hbonds::HBondSet
atom_hbond_energies_	core::scoring::hbonds::NPDHBondSet	private
atom_hbond_sfxn_wtd_energies_	core::scoring::hbonds::NPDHBondSet	private
atom_hbond_weights_	core::scoring::hbonds::NPDHBondSet	private
atom_hbonds(AtomID const &atom, bool include_only_allowed=true) const	core::scoring::hbonds::HBondSet
atom_hbonds_all(AtomID const &atom) const	core::scoring::hbonds::HBondSet
AtomID typedef	core::scoring::hbonds::NPDHBondSet	private
clear()	core::scoring::hbonds::HBondSet
clone() const override	core::scoring::hbonds::NPDHBondSet
copy_bb_donor_acceptor_arrays(HBondSet const &src)	core::scoring::hbonds::HBondSet
d_hbond_weight_dE(id::AtomID const &id, Size hbond_fixed_index, Size hbond_changing_index) const	core::scoring::hbonds::NPDHBondSet
derive_per_hbond_donor_and_acceptor_weights(pose::Pose const &pose)	core::scoring::hbonds::NPDHBondSet	private
dEtot_dEhb(Size hbond_index) const	core::scoring::hbonds::NPDHBondSet
dEtot_dEhb_	core::scoring::hbonds::NPDHBondSet	private
don_bbg_in_bb_bb_hbond(Size const residue) const	core::scoring::hbonds::HBondSet
dwt_dE_for_hbond_	core::scoring::hbonds::NPDHBondSet	private
get_weights_for_one_partner_hbonder(id::AtomID jj_id)	core::scoring::hbonds::NPDHBondSet	private
get_weights_for_two_partner_hbonder(id::AtomID jj_id)	core::scoring::hbonds::NPDHBondSet	private
hbond(Size const number) const	core::scoring::hbonds::HBondSet
hbond_acc_npd_weight(Size index, Real setting)	core::scoring::hbonds::HBondSet	protected
hbond_cop(Size const number) const	core::scoring::hbonds::HBondSet
hbond_don_npd_weight(Size index, Real setting)	core::scoring::hbonds::HBondSet	protected
hbond_options() const	core::scoring::hbonds::HBondSet
hbond_weight(id::AtomID const &id, Size hbond_index) const	core::scoring::hbonds::NPDHBondSet
hbonds() const	core::scoring::hbonds::HBondSet
HBondSet()	core::scoring::hbonds::HBondSet
HBondSet(Size const nres)	core::scoring::hbonds::HBondSet
HBondSet(HBondOptions const &options)	core::scoring::hbonds::HBondSet
HBondSet(HBondOptions const &options, Size const nres)	core::scoring::hbonds::HBondSet
HBondSet(pose::Pose &pose, bool const bb_only=true)	core::scoring::hbonds::HBondSet
HBondSet(HBondOptions const &options, pose::Pose &pose, bool const bb_only=true)	core::scoring::hbonds::HBondSet
HBondSet(core::conformation::Residue const &res1, core::conformation::Residue const &res2, core::scoring::hbonds::HBondDatabase const &database)	core::scoring::hbonds::HBondSet
HBondSet(HBondOptions const &options, core::conformation::Residue const &res1, core::conformation::Residue const &res2, core::scoring::hbonds::HBondDatabase const &database)	core::scoring::hbonds::HBondSet
HBondSet(HBondSet const &src)	core::scoring::hbonds::HBondSet
HBondSet(HBondSet const &src, utility::vector1< core::Size > exclude_list)	core::scoring::hbonds::HBondSet
HBondSet(HBondSet const &src, utility::vector1< bool > residue_mask)	core::scoring::hbonds::HBondSet
HBondSet(HBondSet const &src, Size seqpos)	core::scoring::hbonds::HBondSet
nbrs(Size const seqpos) const	core::scoring::hbonds::HBondSet
nhbonds() const	core::scoring::hbonds::HBondSet
nhbonds(Size const seqpos, bool include_only_allowed=true) const	core::scoring::hbonds::HBondSet
nhbonds(AtomID const &atom, bool include_only_allowed=true) const	core::scoring::hbonds::HBondSet
NPDHBondSet()	core::scoring::hbonds::NPDHBondSet
NPDHBondSet(Size const nres)	core::scoring::hbonds::NPDHBondSet
NPDHBondSet(HBondOptions const &options)	core::scoring::hbonds::NPDHBondSet
NPDHBondSet(HBondOptions const &options, Size const nres)	core::scoring::hbonds::NPDHBondSet
NPDHBondSet(pose::Pose &pose, EnergyMap const &weights)	core::scoring::hbonds::NPDHBondSet
NPDHBondSet(HBondOptions const &options, pose::Pose &pose, EnergyMap const &wights)	core::scoring::hbonds::NPDHBondSet
NPDHBondSet(NPDHBondSet const &src)	core::scoring::hbonds::NPDHBondSet
NPDHBondSet(NPDHBondSet const &src, utility::vector1< core::Size > const &exclude_list)	core::scoring::hbonds::NPDHBondSet
NPDHBondSet(NPDHBondSet const &src, utility::vector1< bool > const &residue_mask)	core::scoring::hbonds::NPDHBondSet
NPDHBondSet(NPDHBondSet const &src, Size seqpos)	core::scoring::hbonds::NPDHBondSet
operator<<(std::ostream &out, const NPDHBondSet &hbond_set)	core::scoring::hbonds::NPDHBondSet	friend
operator==(NPDHBondSet const &a, NPDHBondSet const &b)	core::scoring::hbonds::NPDHBondSet	friend
parent typedef	core::scoring::hbonds::NPDHBondSet	private
residue_hbonds(Size const seqpos, bool include_only_allowed=true) const	core::scoring::hbonds::HBondSet
resize_bb_donor_acceptor_arrays(Size const new_dimension)	core::scoring::hbonds::HBondSet
set_backbone_backbone_acceptor(Size const residue, bool state)	core::scoring::hbonds::HBondSet	inline
set_backbone_backbone_donor(Size const residue, bool state)	core::scoring::hbonds::HBondSet	inline
set_hbond_options(HBondOptions const &options)	core::scoring::hbonds::HBondSet
set_nbrs(Size const seqpos, Size value)	core::scoring::hbonds::HBondSet
setup_for_residue_pair_energies(pose::Pose const &pose, bool const calculate_derivative=false)	core::scoring::hbonds::NPDHBondSet
core::scoring::hbonds::HBondSet::setup_for_residue_pair_energies(pose::Pose const &pose, bool const calculate_derivative=false, bool const backbone_only=true)	core::scoring::hbonds::HBondSet
sfxn_weights_	core::scoring::hbonds::NPDHBondSet	private
show(std::ostream &out) const	core::scoring::hbonds::NPDHBondSet
show() const	core::scoring::hbonds::NPDHBondSet
show(pose::Pose const &pose, bool const print_header, std::ostream &out) const	core::scoring::hbonds::NPDHBondSet
show(pose::Pose const &pose, bool const print_header=true) const	core::scoring::hbonds::NPDHBondSet
show(pose::Pose const &pose, Size const residue, bool const print_header, std::ostream &out) const	core::scoring::hbonds::NPDHBondSet
show(pose::Pose const &pose, Size const residue, bool const print_header=true) const	core::scoring::hbonds::NPDHBondSet
sort_by_weighted_energy()	core::scoring::hbonds::HBondSet
sum_dEtot_dEhb_for_atom(id::AtomID const &jj_id)	core::scoring::hbonds::NPDHBondSet	private
~HBondSet() override	core::scoring::hbonds::HBondSet
~NPDHBondSet() override	core::scoring::hbonds::NPDHBondSet