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protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinement Member List

This is the complete list of members for protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinement, including all inherited members.

apply(core::pose::Pose &pose) overrideprotocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementvirtual
clear_info()protocols::moves::Moverinlinevirtual
clone() const overrideprotocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementvirtual
create()protocols::moves::Movervirtual
flags_protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementprivate
fresh_instance() const overrideprotocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementvirtual
ft_docking_protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementprivate
ft_substrate_protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementprivate
get_additional_output()protocols::moves::Movervirtual
get_current_job() const protocols::moves::Mover
get_current_tag() const protocols::moves::Moverinline
get_docking_foldtree()protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementinline
get_input_pose() const protocols::moves::Mover
get_last_move_status() const protocols::moves::Mover
get_name() const overrideprotocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementvirtual
get_native_pose() const protocols::moves::Mover
get_options()protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementinline
get_scorefunction()protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementinline
get_self_ptr() const protocols::moves::Moverinline
get_self_ptr()protocols::moves::Moverinline
get_self_weak_ptr() const protocols::moves::Moverinline
get_self_weak_ptr()protocols::moves::Moverinline
get_substrate_foldtree()protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementinline
get_target_attractive_weight()protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementinline
get_target_repulsive_weight()protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementinline
get_type() const protocols::moves::Moverinline
GlycopeptideDockingHighResRefinement()protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinement
GlycopeptideDockingHighResRefinement(protocols::glycopeptide_docking::GlycopeptideDockingFlagsOP flags, core::scoring::ScoreFunctionOP sf, core::kinematics::FoldTreeOP ft_docking, core::kinematics::FoldTreeOP ft_substrate)protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinement
GlycopeptideDockingHighResRefinement(protocols::glycopeptide_docking::GlycopeptideDockingFlagsOP flags, core::scoring::ScoreFunctionOP sf)protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinement
GlycopeptideDockingHighResRefinement(GlycopeptideDockingHighResRefinement const &src)protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinement
info()protocols::moves::Moverinlinevirtual
info() const protocols::moves::Moverinlinevirtual
jump_minimizer_protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementprivate
kt_protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementprivate
last_proposal_density_ratio()protocols::moves::Moverinlinevirtual
mc_protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementprivate
Mover()protocols::moves::Mover
Mover(std::string const &type_name)protocols::moves::Mover
mover_name()protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementstatic
name()protocols::moves::Moverinlinestatic
packer_interface_protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementprivate
packer_substrate_protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementprivate
parse_my_tag(TagCOP tag, basic::datacache::DataMap &data)protocols::moves::Movervirtual
perturber_protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementprivate
Pose typedefprotocols::moves::Mover
PoseCOP typedefprotocols::moves::Mover
provide_citation_info(basic::citation_manager::CitationCollectionList &) const protocols::moves::Movervirtual
ramp_score_weight(core::scoring::ScoreType const method, core::Real const target, core::Real const fraction_completion)protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementprivate
register_options()protocols::moves::Moverinlinestatic
reinitialize_for_each_job() const protocols::moves::Movervirtual
reinitialize_for_new_input() const protocols::moves::Movervirtual
reset_status()protocols::moves::Mover
set_current_job(protocols::jobdist::BasicJobCOP job)protocols::moves::Mover
set_current_tag(std::string const &new_tag)protocols::moves::Moverinlinevirtual
set_docking_foldtree(core::kinematics::FoldTreeOP ft_docking)protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementinline
set_input_pose(PoseCOP pose)protocols::moves::Movervirtual
set_last_move_status(MoverStatus status)protocols::moves::Moverprotected
set_native_pose(PoseCOP pose)protocols::moves::Movervirtual
set_options(protocols::glycopeptide_docking::GlycopeptideDockingFlagsOP flags)protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementinline
set_scorefunction(core::scoring::ScoreFunctionOP sf)protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementinline
set_substrate_foldtree(core::kinematics::FoldTreeOP ft_substrate)protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementinline
set_target_attractive_weight(core::Real w)protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementinline
set_target_repulsive_weight(core::Real w)protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementinline
set_type(std::string const &setting)protocols::moves::Moverinline
setup()protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinement
sf_protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementprivate
shear_mover_protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementprivate
show(std::ostream &output=std::cout) const overrideprotocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementvirtual
small_mover_protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementprivate
starting_ramp_down_factor_protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementprivate
starting_ramp_up_factor_protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementprivate
Strings typedefprotocols::moves::Mover
TagCOP typedefprotocols::moves::Mover
target_atr_protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementprivate
target_rep_protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementprivate
test_move(Pose &pose)protocols::moves::Moverinlinevirtual
torsion_minimizer_protocols::glycopeptide_docking::GlycopeptideDockingHighResRefinementprivate
type(const std::string &type_in)protocols::moves::Moverinline
type() const protocols::moves::Moverinline
~GlycopeptideDockingHighResRefinement() overrideprotocols::glycopeptide_docking::GlycopeptideDockingHighResRefinement