| binding(core::pose::Pose pose) | protocols::residue_optimization::MetapatchEnumeration | private |
| evaluation_score_fxn_ | protocols::residue_optimization::MetapatchEnumeration | private |
| final_sampling(core::pose::Pose &mut_pose, core::Size resi) | protocols::residue_optimization::MetapatchEnumeration | private |
| final_scores() | protocols::residue_optimization::MetapatchEnumeration | inline |
| final_scores_ | protocols::residue_optimization::MetapatchEnumeration | private |
| generate_derived_types(core::Size resi, core::Size tp, utility::vector1< std::string > &types_considered) | protocols::residue_optimization::MetapatchEnumeration | private |
| generate_metapatched_variants(core::Size resi) | protocols::residue_optimization::MetapatchEnumeration | |
| initial_sampling(core::pose::Pose &pose) | protocols::residue_optimization::MetapatchEnumeration | private |
| metapatch_names_ | protocols::residue_optimization::MetapatchEnumeration | private |
| MetapatchEnumeration(core::pose::Pose pose, core::kinematics::MoveMapOP mm, core::scoring::ScoreFunctionOP score_fxn, core::Size mode, bool pack, core::Real threshold, utility::vector1< std::string > metapatch_names, core::Real taboo=5) | protocols::residue_optimization::MetapatchEnumeration | inline |
| mm_ | protocols::residue_optimization::MetapatchEnumeration | private |
| mode_ | protocols::residue_optimization::MetapatchEnumeration | private |
| pack_ | protocols::residue_optimization::MetapatchEnumeration | private |
| pose_ | protocols::residue_optimization::MetapatchEnumeration | private |
| sampling_score_fxn_ | protocols::residue_optimization::MetapatchEnumeration | private |
| score() | protocols::residue_optimization::MetapatchEnumeration | inline |
| score_ | protocols::residue_optimization::MetapatchEnumeration | private |
| summary_lines() | protocols::residue_optimization::MetapatchEnumeration | inline |
| summary_lines_ | protocols::residue_optimization::MetapatchEnumeration | private |
| taboo_ | protocols::residue_optimization::MetapatchEnumeration | private |
| tabooed(utility::vector1< std::string > const &patch_names) | protocols::residue_optimization::MetapatchEnumeration | private |
| tabooed_ | protocols::residue_optimization::MetapatchEnumeration | private |
| threshold_ | protocols::residue_optimization::MetapatchEnumeration | private |