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Rosetta
2021.16
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Rosetta
2021.16
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#include <PatchOperation.hh>
Public Member Functions | |
| ChangeAncestory (std::string const &target_atom, Ancestor which_ancestor, std::string const &ancestor_name) | |
| constructor More... | |
| bool | apply (MutableResidueType &rsd) const override |
| change the ancestory, but leave the icoors intact. More... | |
| std::string | name () const override |
| Return the name of this PatchOperation ("ChangeAncestory"). More... | |
 Public Member Functions inherited from core::chemical::PatchOperation | |
| ~PatchOperation () override | |
| Automatically generated virtual destructor for class deriving directly from VirtualBase. More... | |
| virtual utility::vector1 < std::string > | adds_atoms () |
| Which atom(s), if any, is/are added. Used for fast matching of ResidueType/Patches to PDB residues. More... | |
| virtual std::string | deletes_atom () |
| Which atom, if any, is deleted. Used for fast matching of ResidueType/Patches to PDB residues. More... | |
| virtual std::string | adds_property () const |
| Which property, if any, is added. More... | |
| virtual ResidueProperty | adds_property_enum () const |
| Which property, if any, is added. More... | |
| virtual std::string | deletes_property () const |
| Which property, if any, is deleted. More... | |
| virtual ResidueProperty | deletes_property_enum () const |
| Which property, if any, is deleted. More... | |
| virtual std::string | deletes_variant () const |
| Which variant, if any, is deleted. More... | |
| virtual VariantType | deletes_variant_enum () const |
| Which variant, if any, is deleted, by enum. More... | |
| virtual bool | may_change_aa () |
| Generates a new aa. More... | |
| virtual bool | changes_connections_on (ResidueType const &, std::string const &) const |
| Can this case change connections for the atom on the residue? More... | |
| virtual std::string | generates_name3 () |
| Generates name3. More... | |
| virtual std::string | generates_interchangeability_group () |
| Generates interchangeability_group. More... | |
| virtual bool | generates_base_residue_type () const |
| Generates base residue – legacy for D_AA – do not use otherwise. More... | |
| virtual bool | applies_to_placeholder () const |
| Special – does this apply to 'minimal', placeholder types? Generally true, unless updating aa or name3. More... | |
Private Attributes | |
| std::string | atom_ |
| atom's name More... | |
| Ancestor | which_ancestor_ |
| std::string | ancestor_name_ |
| core::chemical::ChangeAncestory::ChangeAncestory | ( | std::string const & | target_atom, |
| Ancestor | which_ancestor, | ||
| std::string const & | ancestor_name | ||
| ) |
constructor
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overridevirtual |
change the ancestory, but leave the icoors intact.
Implements core::chemical::PatchOperation.
References core::chemical::anc_grandparent, core::chemical::anc_greatgrandparent, core::chemical::anc_parent, ancestor_name_, atom_, core::chemical::MutableResidueType::atom_vertex(), core::chemical::MutableResidueType::icoor(), core::chemical::ResidueTypeBase::name(), core::chemical::MutableResidueType::set_icoor(), and which_ancestor_.
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overridevirtual |
Return the name of this PatchOperation ("ChangeAncestory").
Implements core::chemical::PatchOperation.
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private |
Referenced by apply().
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private |
atom's name
Referenced by apply().
1.8.7