core::pack::interaction_graph::DensePDEdge Member List

This is the complete list of members for core::pack::interaction_graph::DensePDEdge, including all inherited members.

acknowledge_state_change(int node_ind, int new_state, core::PackerEnergy &new_energy)	core::pack::interaction_graph::DensePDEdge
acknowledge_state_zeroed(int node_ind)	core::pack::interaction_graph::DensePDEdge
acknowledge_substitution(int substituted_node_index, core::PackerEnergy const curr_state_energy, int nodes_new_state)	core::pack::interaction_graph::DensePDEdge	inline
add_to_two_body_energies(ObjexxFCL::FArray2< core::PackerEnergy > const &res_res_energy_array) override	core::pack::interaction_graph::DensePDEdge	virtual
add_to_two_body_energy(int const, int const, core::PackerEnergy const) override	core::pack::interaction_graph::DensePDEdge	virtual
clear_two_body_energy(int const, int const) override	core::pack::interaction_graph::DensePDEdge	virtual
count_dynamic_memory() const override	core::pack::interaction_graph::DensePDEdge	virtual
count_static_memory() const override	core::pack::interaction_graph::DensePDEdge	virtual
curr_state_energy_	core::pack::interaction_graph::DensePDEdge	private
declare_energies_final() override	core::pack::interaction_graph::DensePDEdge	virtual
declare_energies_final_no_deletion()	core::pack::interaction_graph::DensePDEdge	protected
DensePDEdge(InteractionGraphBase *owner, int first_node_ind, int second_node_ind)	core::pack::interaction_graph::DensePDEdge
DensePDEdge()	core::pack::interaction_graph::DensePDEdge	private
DensePDEdge(DensePDEdge const &)	core::pack::interaction_graph::DensePDEdge	private
edge_weight() const	core::pack::interaction_graph::EdgeBase	inline
edge_weight(Real)	core::pack::interaction_graph::EdgeBase	protected
EdgeBase(InteractionGraphBase *owner, int first_node_ind, int second_node_ind)	core::pack::interaction_graph::EdgeBase
energies_updated_since_last_prep_for_simA_	core::pack::interaction_graph::DensePDEdge	private
FixedBBEdge(InteractionGraphBase *owner, int first_node_ind, int second_node_ind)	core::pack::interaction_graph::FixedBBEdge	inline
force_aa_neighbors(int, int) override	core::pack::interaction_graph::DensePDEdge	inlinevirtual
force_all_aa_neighbors() override	core::pack::interaction_graph::DensePDEdge	inlinevirtual
get_aa_submatrix_energies() const	core::pack::interaction_graph::DensePDEdge
get_alternate_state_energy(int first_node_state, int second_node_state, ObjexxFCL::FArray2< core::PackerEnergy > &edge_energy_table)	core::pack::interaction_graph::DensePDEdge	inlinestatic
get_current_two_body_energy()	core::pack::interaction_graph::DensePDEdge
get_dpd_node(int index)	core::pack::interaction_graph::DensePDEdge	inlineprivate
get_dpd_node(int index) const	core::pack::interaction_graph::DensePDEdge	inlineprivate
get_dpdig_owner()	core::pack::interaction_graph::DensePDEdge	inlineprivate
get_dpdig_owner() const	core::pack::interaction_graph::DensePDEdge	inlineprivate
get_edge_table_ptr()	core::pack::interaction_graph::DensePDEdge
get_edges_position_in_nodes_edge_vector(int index) const	core::pack::interaction_graph::EdgeBase	inlineprotected
get_first_node_ind() const	core::pack::interaction_graph::EdgeBase
get_node(int index) const	core::pack::interaction_graph::EdgeBase	inlineprotected
get_node(int index)	core::pack::interaction_graph::EdgeBase	inlineprotected
get_node_index(int index) const	core::pack::interaction_graph::EdgeBase	inlineprotected
get_num_states_for_node(int index) const	core::pack::interaction_graph::EdgeBase	inlineprotected
get_other_ind(int callers_index) const	core::pack::interaction_graph::EdgeBase
get_other_node(int callers_index) const	core::pack::interaction_graph::EdgeBase
get_owner() const	core::pack::interaction_graph::EdgeBase	inline
get_owner()	core::pack::interaction_graph::EdgeBase	inline
get_second_node_ind() const	core::pack::interaction_graph::EdgeBase
get_sparse_aa_info(int, int) const override	core::pack::interaction_graph::DensePDEdge	virtual
get_two_body_energy(int const, int const ) const override	core::pack::interaction_graph::DensePDEdge	virtual
get_two_body_table_size() const	core::pack::interaction_graph::DensePDEdge
mark_edge_for_deletion()	core::pack::interaction_graph::EdgeBase	inlineprotected
marked_for_deletion() const	core::pack::interaction_graph::EdgeBase	inline
operator=(DensePDEdge const &)	core::pack::interaction_graph::DensePDEdge	private
pd_edge_table_all_zeros()	core::pack::interaction_graph::DensePDEdge	protected
PrecomputedPairEnergiesEdge(InteractionGraphBase *owner, int first_node_ind, int second_node_ind)	core::pack::interaction_graph::PrecomputedPairEnergiesEdge	inline
prepare_for_simulated_annealing() override	core::pack::interaction_graph::DensePDEdge	virtual
prepare_for_simulated_annealing_no_deletion()	core::pack::interaction_graph::DensePDEdge	protected
same_edge(int node1, int node2) const	core::pack::interaction_graph::EdgeBase
set_edge_weight(Real weight) override	core::pack::interaction_graph::DensePDEdge	virtual
set_pos_in_node_edgevector(int callers_index, int position)	core::pack::interaction_graph::EdgeBase
set_pos_in_owners_list(std::list< EdgeBase * >::iterator edge_iterator)	core::pack::interaction_graph::EdgeBase
set_sparse_aa_info(ObjexxFCL::FArray2_bool const &) override	core::pack::interaction_graph::DensePDEdge	inlinevirtual
set_two_body_energy(int const, int const, core::PackerEnergy const) override	core::pack::interaction_graph::DensePDEdge	virtual
swap_edge_energies(ObjexxFCL::FArray2D< core::PackerEnergy > &new_edge_table)	core::pack::interaction_graph::DensePDEdge
two_body_energies_	core::pack::interaction_graph::DensePDEdge	private
which_node(int node_index) const	core::pack::interaction_graph::EdgeBase	inlineprotected
~DensePDEdge() override	core::pack::interaction_graph::DensePDEdge
~EdgeBase()	core::pack::interaction_graph::EdgeBase	virtual
~FixedBBEdge() override	core::pack::interaction_graph::FixedBBEdge	inline
~PrecomputedPairEnergiesEdge() override	core::pack::interaction_graph::PrecomputedPairEnergiesEdge	inline