protocols::denovo_design::movers::FoldArchitectMover Member List

This is the complete list of members for protocols::denovo_design::movers::FoldArchitectMover, including all inherited members.

add_filter(protocols::filters::Filter const &filter)	protocols::denovo_design::movers::FoldArchitectMover
add_postfold_mover(protocols::moves::Mover const &mover)	protocols::denovo_design::movers::FoldArchitectMover
add_prefold_mover(protocols::moves::Mover const &mover)	protocols::denovo_design::movers::FoldArchitectMover
apply(core::pose::Pose &pose) override	protocols::denovo_design::movers::FoldArchitectMover	virtual
apply_movers(MoverOPs const &movers, core::pose::Pose &pose) const	protocols::denovo_design::movers::FoldArchitectMover	private
architect_	protocols::denovo_design::movers::FoldArchitectMover	private
build_denovo_backbone_ct_naming_func(std::string)	protocols::denovo_design::movers::FoldArchitectMover	privatestatic
build_in_phases(components::StructureData const &full_sd, components::BuildPhases const &phases, SegmentNameSet const &finished, core::Size const phase_num) const	protocols::denovo_design::movers::FoldArchitectMover	private
build_overlap_	protocols::denovo_design::movers::FoldArchitectMover	private
builder_	protocols::denovo_design::movers::FoldArchitectMover	private
check_and_accept(core::pose::Pose const &orig, core::pose::Pose &pose, FoldScore &bestscore) const	protocols::denovo_design::movers::FoldArchitectMover	private
check_pose(core::pose::Pose const &pose) const	protocols::denovo_design::movers::FoldArchitectMover	private
clear_filters()	protocols::denovo_design::movers::FoldArchitectMover
clear_info()	protocols::moves::Mover	inlinevirtual
clear_postfold_movers()	protocols::denovo_design::movers::FoldArchitectMover
clear_prefold_movers()	protocols::denovo_design::movers::FoldArchitectMover
clone() const override	protocols::denovo_design::movers::FoldArchitectMover	virtual
ConnectionArchitectCOPs typedef	protocols::denovo_design::movers::FoldArchitectMover
connections_ct_naming_func(std::string)	protocols::denovo_design::movers::FoldArchitectMover	privatestatic
ConstraintGeneratorCOP typedef	protocols::denovo_design::movers::FoldArchitectMover
ConstraintGeneratorCOPs typedef	protocols::denovo_design::movers::FoldArchitectMover
ConstraintGeneratorOP typedef	protocols::denovo_design::movers::FoldArchitectMover
create()	protocols::moves::Mover	virtual
create_constraint_generators(ResidueVector const &residues) const	protocols::denovo_design::movers::FoldArchitectMover	private
create_loops(core::pose::Pose const &pose, ResidueVector &overlap_residues, SegmentNames &movable_segments) const	protocols::denovo_design::movers::FoldArchitectMover	private
create_overlap_constraint_generator(ResidueVector const &residues) const	protocols::denovo_design::movers::FoldArchitectMover	private
debug_	protocols::denovo_design::movers::FoldArchitectMover	private
default_score_filter()	protocols::denovo_design::movers::FoldArchitectMover	privatestatic
define_filters_ct(utility::tag::XMLSchemaDefinition &)	protocols::denovo_design::movers::FoldArchitectMover	privatestatic
define_folder_group(utility::tag::XMLSchemaDefinition &)	protocols::denovo_design::movers::FoldArchitectMover	privatestatic
define_perturber_group(utility::tag::XMLSchemaDefinition &)	protocols::denovo_design::movers::FoldArchitectMover	privatestatic
define_postfold_movers_ct(utility::tag::XMLSchemaDefinition &)	protocols::denovo_design::movers::FoldArchitectMover	privatestatic
define_prefold_movers_ct(utility::tag::XMLSchemaDefinition &)	protocols::denovo_design::movers::FoldArchitectMover	privatestatic
dry_run_	protocols::denovo_design::movers::FoldArchitectMover	private
dump_pdbs_	protocols::denovo_design::movers::FoldArchitectMover	private
FilterCOPs typedef	protocols::denovo_design::movers::FoldArchitectMover
filters_	protocols::denovo_design::movers::FoldArchitectMover	private
filters_ct_naming_func(std::string)	protocols::denovo_design::movers::FoldArchitectMover	privatestatic
find_roots(core::pose::Pose const &pose, protocols::loops::Loops const &loops) const	protocols::denovo_design::movers::FoldArchitectMover	private
fold(core::pose::Pose &pose) const	protocols::denovo_design::movers::FoldArchitectMover	private
fold_attempt(core::pose::Pose &pose) const	protocols::denovo_design::movers::FoldArchitectMover	private
FoldArchitectMover()	protocols::denovo_design::movers::FoldArchitectMover
folder_	protocols::denovo_design::movers::FoldArchitectMover	private
folder_ct_namer(std::string)	protocols::denovo_design::movers::FoldArchitectMover	privatestatic
folder_group_name()	protocols::denovo_design::movers::FoldArchitectMover	privatestatic
folding_score(core::pose::Pose const &pose) const	protocols::denovo_design::movers::FoldArchitectMover	private
FoldScore typedef	protocols::denovo_design::movers::FoldArchitectMover
fresh_instance() const override	protocols::denovo_design::movers::FoldArchitectMover	virtual
get_additional_output()	protocols::moves::Mover	virtual
get_current_job() const	protocols::moves::Mover
get_current_tag() const	protocols::moves::Mover	inline
get_input_pose() const	protocols::moves::Mover
get_last_move_status() const	protocols::moves::Mover
get_name() const override	protocols::denovo_design::movers::FoldArchitectMover	virtual
get_native_pose() const	protocols::moves::Mover
get_self_ptr() const	protocols::moves::Mover	inline
get_self_ptr()	protocols::moves::Mover	inline
get_self_weak_ptr() const	protocols::moves::Mover	inline
get_self_weak_ptr()	protocols::moves::Mover	inline
get_type() const	protocols::moves::Mover	inline
id() const	protocols::denovo_design::movers::FoldArchitectMover
id_	protocols::denovo_design::movers::FoldArchitectMover	private
info()	protocols::moves::Mover	inlinevirtual
info() const	protocols::moves::Mover	inlinevirtual
iterations_per_phase_	protocols::denovo_design::movers::FoldArchitectMover	private
last_proposal_density_ratio()	protocols::moves::Mover	inlinevirtual
Mover()	protocols::moves::Mover
Mover(std::string const &type_name)	protocols::moves::Mover
mover_name()	protocols::denovo_design::movers::FoldArchitectMover	static
MoverOPs typedef	protocols::denovo_design::movers::FoldArchitectMover
name()	protocols::moves::Mover	inlinestatic
parse_architect(utility::tag::TagCOP tag, basic::datacache::DataMap &data)	protocols::denovo_design::movers::FoldArchitectMover	private
parse_filters(utility::tag::TagCOP tag, basic::datacache::DataMap &data)	protocols::denovo_design::movers::FoldArchitectMover	private
parse_folder(utility::tag::TagCOP tag, basic::datacache::DataMap &data)	protocols::denovo_design::movers::FoldArchitectMover	private
parse_movers(utility::tag::TagCOP tag, basic::datacache::DataMap &data) const	protocols::denovo_design::movers::FoldArchitectMover	private
parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &data) override	protocols::denovo_design::movers::FoldArchitectMover	virtual
parse_perturber(utility::tag::TagCOP tag, basic::datacache::DataMap &data)	protocols::denovo_design::movers::FoldArchitectMover	private
parse_postfold_movers(utility::tag::TagCOP tag, basic::datacache::DataMap &data)	protocols::denovo_design::movers::FoldArchitectMover	private
parse_prefold_movers(utility::tag::TagCOP tag, basic::datacache::DataMap &data)	protocols::denovo_design::movers::FoldArchitectMover	private
perturber_	protocols::denovo_design::movers::FoldArchitectMover	private
perturber_ct_namer(std::string)	protocols::denovo_design::movers::FoldArchitectMover	privatestatic
perturber_group_name()	protocols::denovo_design::movers::FoldArchitectMover	privatestatic
Pose typedef	protocols::moves::Mover
PoseCOP typedef	protocols::moves::Mover
postfold_ct_naming_func(std::string)	protocols::denovo_design::movers::FoldArchitectMover	privatestatic
postfold_movers(core::pose::Pose const &pose, protocols::loops::Loops const &loops, ConstraintGeneratorCOPs const &generators) const	protocols::denovo_design::movers::FoldArchitectMover	private
postfold_movers_	protocols::denovo_design::movers::FoldArchitectMover	private
prefold_ct_naming_func(std::string)	protocols::denovo_design::movers::FoldArchitectMover	privatestatic
prefold_movers(core::pose::Pose const &pose, protocols::loops::Loops const &loops, ConstraintGeneratorCOPs const &generators) const	protocols::denovo_design::movers::FoldArchitectMover	private
prefold_movers_	protocols::denovo_design::movers::FoldArchitectMover	private
provide_citation_info(basic::citation_manager::CitationCollectionList &) const	protocols::moves::Mover	virtual
provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd)	protocols::denovo_design::movers::FoldArchitectMover	static
provide_xml_schema_with_name(utility::tag::XMLSchemaDefinition &xsd, std::string const &mover_name)	protocols::denovo_design::movers::FoldArchitectMover	static
register_options()	protocols::moves::Mover	inlinestatic
RegisterShift typedef	protocols::denovo_design::movers::FoldArchitectMover
reinitialize_for_each_job() const	protocols::moves::Mover	virtual
reinitialize_for_new_input() const	protocols::moves::Mover	virtual
remove_cutpoints(components::StructureData &sd, protocols::loops::Loops const &loops) const	protocols::denovo_design::movers::FoldArchitectMover	private
reset_status()	protocols::moves::Mover
ResidueVector typedef	protocols::denovo_design::movers::FoldArchitectMover
score_filter_	protocols::denovo_design::movers::FoldArchitectMover	private
segments_to_fold(components::StructureData const &sd) const	protocols::denovo_design::movers::FoldArchitectMover	private
select_movable_residues(core::pose::Pose const &pose, SegmentNames const &movable_segments, ResidueVector const &overlap_residues) const	protocols::denovo_design::movers::FoldArchitectMover	private
set_architect(architects::DeNovoArchitect const &architect)	protocols::denovo_design::movers::FoldArchitectMover
set_build_overlap(core::Size const overlap_val)	protocols::denovo_design::movers::FoldArchitectMover
set_builder(components::PoseBuilder const &builder)	protocols::denovo_design::movers::FoldArchitectMover
set_builder(components::PoseBuilderOP builder)	protocols::denovo_design::movers::FoldArchitectMover
set_current_job(protocols::jobdist::BasicJobCOP job)	protocols::moves::Mover
set_current_tag(std::string const &new_tag)	protocols::moves::Mover	inlinevirtual
set_debug(bool const debug)	protocols::denovo_design::movers::FoldArchitectMover
set_dump_pdbs(bool const dump)	protocols::denovo_design::movers::FoldArchitectMover	inline
set_folder(components::PoseFolder const &folder)	protocols::denovo_design::movers::FoldArchitectMover
set_folder(components::PoseFolderOP folder)	protocols::denovo_design::movers::FoldArchitectMover
set_id(std::string const &id_value)	protocols::denovo_design::movers::FoldArchitectMover
set_input_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_iterations_per_phase(core::Size const niter)	protocols::denovo_design::movers::FoldArchitectMover
set_last_move_status(MoverStatus status)	protocols::moves::Mover	protected
set_native_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_perturber(components::StructureDataPerturber const &perturber)	protocols::denovo_design::movers::FoldArchitectMover
set_perturber(components::StructureDataPerturberOP perturber)	protocols::denovo_design::movers::FoldArchitectMover
set_score_filter(protocols::filters::Filter const &filter)	protocols::denovo_design::movers::FoldArchitectMover
set_start_segments(std::string const &segments_csv)	protocols::denovo_design::movers::FoldArchitectMover
set_start_segments(SegmentNameSet const &segments)	protocols::denovo_design::movers::FoldArchitectMover
set_stop_segments(std::string const &segments_csv)	protocols::denovo_design::movers::FoldArchitectMover
set_stop_segments(SegmentNameSet const &segments)	protocols::denovo_design::movers::FoldArchitectMover
set_type(std::string const &setting)	protocols::moves::Mover	inline
setup_from_xml_file(std::string const &xml_file, basic::datacache::DataMap &data)	protocols::denovo_design::movers::FoldArchitectMover
setup_from_xml_string(std::string const &xml_string, basic::datacache::DataMap &data)	protocols::denovo_design::movers::FoldArchitectMover
setup_from_xml_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &data)	protocols::denovo_design::movers::FoldArchitectMover
show(std::ostream &output=std::cout) const	protocols::moves::Mover	virtual
start_segments_	protocols::denovo_design::movers::FoldArchitectMover	private
stop_segments_	protocols::denovo_design::movers::FoldArchitectMover	private
StrandOrientation typedef	protocols::denovo_design::movers::FoldArchitectMover
Strings typedef	protocols::moves::Mover
TagCOP typedef	protocols::moves::Mover
test_move(Pose &pose)	protocols::moves::Mover	inlinevirtual
type(const std::string &type_in)	protocols::moves::Mover	inline
type() const	protocols::moves::Mover	inline
~FoldArchitectMover() override	protocols::denovo_design::movers::FoldArchitectMover